RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 RPL17P18621 184 aaKnown RBP12.05□□□□□ -0.48
SNIP1-201ENST00000296215 SFNP31947 248 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 NFYCQ13952 458 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 GIT2Q14161 759 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 HIF1AQ16665 826 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 TMEM26Q6ZUK4 368 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 RASAL3Q86YV0 1011 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 FANK1Q8TC84 345 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 HM13Q8TCT9 377 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 ELMO1Q92556 727 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 ERGIC2Q96RQ1 377 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 APOL5Q9BWW9 433 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 C1QTNF1Q9BXJ1 281 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 POLIQ9UNA4 740 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 DNAJC16Q9Y2G8 782 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 TRAPPC8Q9Y2L5 1435 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 PLA2R1Q13018 1463 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 SGCEO43556 437 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 ZNF45Q02386 682 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 FOXB2Q5VYV0 432 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 KIF18BQ86Y91 864 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 FOXP4Q8IVH2 680 aaPredicted RBP12.05□□□□□ -0.48
SNIP1-201ENST00000296215 EFCAB3Q8N7B9 438 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 TPCN2Q8NHX9 752 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 TCP10LQ8TDR4 215 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 KCTD14Q9BQ13 255 aaPredicted RBP12.05□□□□□ -0.48
SNIP1-201ENST00000296215 C6orf50Q9HD87 102 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 PTCH1Q13635 1447 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 PLEKHG1Q9ULL1 1385 aa12.05□□□□□ -0.48
SNIP1-201ENST00000296215 FAM237BA0A1B0GVD1 139 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 E7ENX8 843 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 RPA3P35244 121 aaPredicted RBP12.04□□□□□ -0.48
SNIP1-201ENST00000296215 CCDC142Q17RM4 750 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 KIZQ2M2Z5 673 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 KIF19Q2TAC6 998 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 SNX20Q7Z614 316 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 C11orf96Q7Z7L8 435 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 Q8N9G6 341 aaPredicted RBP12.04□□□□□ -0.48
SNIP1-201ENST00000296215 DEPDC1BQ8WUY9 529 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 FAM136AQ96C01 138 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 HDAC11Q96DB2 347 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 CYP4F12Q9HCS2 524 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 GMDSO60547 372 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 ZNF182P17025 639 aaPredicted RBP12.04□□□□□ -0.48
SNIP1-201ENST00000296215 NR2F2P24468 414 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 FASP25445 335 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 RPL21P46778 160 aaKnown RBP12.04□□□□□ -0.48
SNIP1-201ENST00000296215 PPM1FP49593 454 aaPredicted RBP12.04□□□□□ -0.48
SNIP1-201ENST00000296215 CYP4F2P78329 520 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 CYP4F3Q08477 520 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 MMRN1Q13201 1228 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 PTK7Q13308 1070 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 MEA1Q16626 185 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 FAM91A1Q658Y4 838 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 LRRC17Q8N6Y2 441 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 XXYLT1Q8NBI6 393 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 TEX47Q8TBZ9 253 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 NCSTNQ92542 709 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 DDX17Q92841 729 aaKnown RBP12.04□□□□□ -0.48
SNIP1-201ENST00000296215 DCAF16Q9NXF7 216 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 ANKMY1Q9P2S6 941 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 PNPLA6Q8IY17 1366 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 ABCA5Q8WWZ7 1642 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 LRRN2O75325 713 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 KATNA1O75449 491 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 PSIP1O75475 530 aaKnown RBP12.04□□□□□ -0.48
SNIP1-201ENST00000296215 ATP5BP06576 529 aaKnown RBP12.04□□□□□ -0.48
SNIP1-201ENST00000296215 PROS1P07225 676 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 CLUP10909 449 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 CHRNDQ07001 517 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 AP3B2Q13367 1082 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 ZNF284Q2VY69 593 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 TRIQKQ629K1 86 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 SLC35G2Q8TBE7 412 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 SLA2Q9H6Q3 261 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 ZSWIM5Q9P217 1185 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 PACSIN3Q9UKS6 424 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 AP3M1Q9Y2T2 418 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 WDR64B1ANS9 1081 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 SNAP91O60641 907 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 HUS1O60921 280 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 RFPL2O75678 378 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 PKLRP30613 574 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 COTL1Q14019 142 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 TBCELQ5QJ74 424 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 PDPK2PQ6A1A2 396 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 METTL2AQ96IZ6 378 aaKnown RBP12.04□□□□□ -0.48
SNIP1-201ENST00000296215 C7orf26Q96N11 449 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 ZNF347Q96SE7 839 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 SSX3Q99909 188 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 C9orf16Q9BUW7 83 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 WHRNQ9P202 907 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 SORCS3Q9UPU3 1222 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 CFL2Q9Y281 166 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 HSPB11Q9Y547 144 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 FPGT-TNNI3KV9GXZ4 949 aa12.04□□□□□ -0.48
SNIP1-201ENST00000296215 PRG4Q92954 1404 aaPredicted RBP12.03□□□□□ -0.48
SNIP1-201ENST00000296215 PI4K2BG5E9Z4 385 aa12.03□□□□□ -0.48
SNIP1-201ENST00000296215 C6orf222P0C671 652 aaPredicted RBP12.03□□□□□ -0.48
SNIP1-201ENST00000296215 STILQ15468 1287 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms