RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 C4orf19Q8IY42 314 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 GRHL1Q9NZI5 618 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 SYNDIG1LA6NDD5 238 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 SLC15A5A6NIM6 579 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 LGALS2P05162 132 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 ZFXP17010 805 aaPredicted RBP13.82□□□□□ -0.2
HPS3-201ENST00000296051 STIP1P31948 543 aaKnown RBP13.82□□□□□ -0.2
HPS3-201ENST00000296051 ACADSBP45954 432 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 MAPK10P53779 464 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 CDH8P55286 799 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 PKNOX1P55347 436 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 NFE2Q16621 373 aaPredicted RBP13.82□□□□□ -0.2
HPS3-201ENST00000296051 USP6NLQ92738 828 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 GAD1Q99259 594 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 KANSL3Q9P2N6 904 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 KAT6AQ92794 2004 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 NCANO14594 1321 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 C3orf70A6NLC5 250 aaPredicted RBP13.82□□□□□ -0.2
HPS3-201ENST00000296051 EEF2KO00418 725 aaKnown RBP13.82□□□□□ -0.2
HPS3-201ENST00000296051 SLC11A2P49281 568 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 SERPINB9P50453 376 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 OCA2Q04671 838 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 BST1Q10588 318 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 EFEMP1Q12805 493 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 OVOS1Q6IE37 1185 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 RIPOR1Q6ZS17 1223 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 ZSCAN18Q8TBC5 510 aaPredicted RBP13.82□□□□□ -0.2
HPS3-201ENST00000296051 SLC30A1Q9Y6M5 507 aa13.82□□□□□ -0.2
HPS3-201ENST00000296051 PEAK1Q9H792 1746 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 ATRNO75882 1429 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 SLC26A4O43511 780 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 ACAT1P24752 427 aaKnown RBP13.81□□□□□ -0.2
HPS3-201ENST00000296051 FOXN2P32314 431 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 BLMHQ13867 455 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 ZDHHC24Q6UX98 284 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 CLNKQ7Z7G1 428 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 SNX19Q92543 992 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 TRIM54Q9BYV2 358 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 SAR1AQ9NR31 198 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 STX18Q9P2W9 335 aaKnown RBP13.81□□□□□ -0.2
HPS3-201ENST00000296051 FBXL21Q9UKT6 434 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 SPDYE5A6NIY4 337 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 M0QYT0 321 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 FSCN2O14926 492 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 AVILO75366 819 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 SPAG6O75602 509 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 SERPIND1P05546 499 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 CRADDP78560 199 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 MRPS22P82650 360 aaKnown RBP13.81□□□□□ -0.2
HPS3-201ENST00000296051 CRY2Q49AN0 593 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 N4BP2L1Q5TBK1 243 aaPredicted RBP13.81□□□□□ -0.2
HPS3-201ENST00000296051 CACUL1Q86Y37 369 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 ADGRF2Q8IZF7 708 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 TMEM199Q8N511 208 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 ASAP3Q8TDY4 903 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 LATS2Q9NRM7 1088 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 SYCE1LA8MT33 242 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 RALBP11234 206 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 GPD1P21695 349 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 PLIN5Q00G26 463 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 UBAP2LQ14157 1087 aaKnown RBP13.81□□□□□ -0.2
HPS3-201ENST00000296051 SLC35G1Q2M3R5 365 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 C6orf89Q6UWU4 347 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 SEMA4DQ92854 862 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 NCLNQ969V3 563 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 APOL5Q9BWW9 433 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 LRRC4CQ9HCJ2 640 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 MAN1C1Q9NR34 630 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 SUN2Q9UH99 717 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 CHKBQ9Y259 395 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.81□□□□□ -0.2
HPS3-201ENST00000296051 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.81□□□□□ -0.2
HPS3-201ENST00000296051 AHCYL1O43865 530 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 FGRP09769 529 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 UBA1P22314 1058 aaKnown RBP13.81□□□□□ -0.2
HPS3-201ENST00000296051 ZNF177Q13360 481 aaPredicted RBP13.81□□□□□ -0.2
HPS3-201ENST00000296051 PDPK2PQ6A1A2 396 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 FAM71AQ8IYT1 594 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 KREMEN1Q96MU8 473 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 WDR18Q9BV38 432 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 MRIQ9BWK5 157 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 USP18Q9UMW8 372 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 PCDHB8Q9UN66 801 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 CDY2AQ9Y6F7 541 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 CDY1Q9Y6F8 540 aa13.81□□□□□ -0.2
HPS3-201ENST00000296051 MRPL42Q9Y6G3 142 aaKnown RBP13.81□□□□□ -0.2
HPS3-201ENST00000296051 BTBD19C9JJ37 291 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 NELFEP18615 380 aaKnown RBP13.8□□□□□ -0.2
HPS3-201ENST00000296051 GTF2H3Q13889 308 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 FBXO47Q5MNV8 452 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 RFWD3Q6PCD5 774 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 GSTCDQ8NEC7 633 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 YIPF2Q9BWQ6 316 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 NMUR2Q9GZQ4 415 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 SLC13A4Q9UKG4 626 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 GAKO14976 1311 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 FKBP6O75344 327 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 TREML2Q5T2D2 321 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 NPNTQ6UXI9 565 aa13.8□□□□□ -0.2
HPS3-201ENST00000296051 DLK2Q6UY11 383 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms