RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 ASAP3Q8TDY4 903 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 ARMC7Q9H6L4 198 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 WWOXQ9NZC7 414 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 FAM205CA6NFA0 338 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 ZNF197O14709 1029 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 RPA3P35244 121 aaPredicted RBP12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 ZNF467Q7Z7K2 595 aaPredicted RBP12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 DPP3Q9NY33 737 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 PACSIN3Q9UKS6 424 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 UBDO15205 165 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 SAMD4BQ5PRF9 694 aaKnown RBP12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 AFTPHQ6ULP2 937 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 GPRASP2Q96D09 838 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 APOPT1Q96IL0 206 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 ZFYVE28Q9HCC9 887 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 MAP3K15Q6ZN16 1313 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 UNC5CO95185 931 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 FESP07332 822 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 ASNSP08243 561 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 FGFR2P21802 821 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 TTKP33981 857 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 BNIP1Q12981 228 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 PFKFB3Q16875 520 aaPredicted RBP12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 SCAIQ8N9R8 606 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 KCTD10Q9H3F6 313 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 ABCB11O95342 1321 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 UMODL1Q5DID0 1318 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 ASCC3Q8N3C0 2202 aaKnown RBP12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 MSL3P1P0C860 447 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 RAD51Q06609 339 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 EML3Q32P44 896 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 ZC2HC1CQ53FD0 456 aaPredicted RBP12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 GPATCH4Q5T3I0 446 aaKnown RBP12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 GJB7Q6PEY0 223 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 CPVLQ9H3G5 476 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 SLC52A2Q9HAB3 445 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 WDR41Q9HAD4 459 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 KPNA6O60684 536 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 PABPC1P11940 636 aaKnown RBP12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 NCOA4Q13772 614 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 PAPD7Q5XG87 772 aaKnown RBP12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 STRA8Q7Z7C7 330 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 SCN4BQ8IWT1 228 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 NGLY1Q96IV0 654 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 RMND5AQ9H871 391 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 MOV10Q9HCE1 1003 aaKnown RBP12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 PREBQ9HCU5 417 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 FAM49BQ9NUQ9 324 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 PLA2G4CQ9UP65 541 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 DDX3XO00571 662 aaKnown RBP eCLIP12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 NPM3O75607 178 aaKnown RBP12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 PTSQ03393 145 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 ITGA9Q13797 1035 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 PROSER3Q2NL68 480 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 FAM120BQ96EK7 910 aaKnown RBP12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 ZNF112Q9UJU3 913 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 CROTQ9UKG9 612 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 GUCY1A2P33402 732 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 GRIA3P42263 894 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 CNKSR1Q969H4 720 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 NSMCE2Q96MF7 247 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 hCG_1984214I3L0E3 225 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 MRASO14807 208 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 FAM228BP0C875 321 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 PRELPP51888 382 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 SEMA3AQ14563 771 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 CAMK1DQ8IU85 385 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 ZNF276Q8N554 614 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 CCDC185Q8N715 623 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 ZNF713Q8N859 430 aaPredicted RBP12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 RPS6KL1Q9Y6S9 549 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 ABCA5Q8WWZ7 1642 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 SAGE2PA6NJ88 616 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 NSUN6Q8TEA1 469 aaKnown RBP12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 OSBPL11Q9BXB4 747 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 RAD17O75943 681 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 WFS1O76024 890 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 CPSF4O95639 269 aaKnown RBP12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 TCP10L2B9ZVM9 353 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 ITGALP20701 1170 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 HMGB2P26583 209 aaKnown RBP12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 GRIK1P39086 918 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 VPS37AQ8NEZ2 397 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 LACRTQ9GZZ8 138 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 FAM217BQ9NTX9 383 aaPredicted RBP12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 A0A1W2PQJ5 194 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 TCEA3O75764 348 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 UQCRBP14927 111 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 PDCD4Q53EL6 469 aaKnown RBP12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 SNRNP48Q6IEG0 339 aaKnown RBP12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 MACC1Q6ZN28 852 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 SEPT12Q8IYM1 358 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 MAP10Q9P2G4 905 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 ZNF12P17014 697 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 SPDYCQ5MJ68 293 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 CABLES1Q8TDN4 633 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 CLEC4AQ9UMR7 237 aa12.04□□□□□ -0.48
SHROOM3-201ENST00000296043 FADS2O95864 444 aaKnown RBP12.03□□□□□ -0.48
SHROOM3-201ENST00000296043 GP5P40197 560 aa12.03□□□□□ -0.48
SHROOM3-201ENST00000296043 NAMPTP43490 491 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms