RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 F7P08709 466 aaPredicted RBP10.49□□□□□ -0.73
CLDN1-201ENST00000295522 ZNF23P17027 643 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 SCNN1DP51172 638 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 ZNF423Q2M1K9 1284 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 FGD3Q5JSP0 725 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 NPNTQ6UXI9 565 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 KIAA2013Q8IYS2 634 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 HACE1Q8IYU2 909 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 PDCD6IPQ8WUM4 868 aaKnown RBP10.49□□□□□ -0.73
CLDN1-201ENST00000295522 CAPSLQ8WWF8 208 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 DHRS1Q96LJ7 313 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 PARVAQ9NVD7 372 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 WRAP73Q9P2S5 460 aaPredicted RBP10.49□□□□□ -0.73
CLDN1-201ENST00000295522 RNF103-CHMP3A0A140T963 221 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 PLSCR1O15162 318 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 BIRC5O15392 142 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 AKAP10O43572 662 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 CLIC3O95833 236 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 CD1EP15812 388 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 CKMT2P17540 419 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 IDH3AP50213 366 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 FAM98CQ17RN3 349 aaKnown RBP10.49□□□□□ -0.73
CLDN1-201ENST00000295522 GALNT18Q6P9A2 607 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 TMEM26Q6ZUK4 368 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 TNS4Q8IZW8 715 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 LILRA2Q8N149 483 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 PCDH20Q8N6Y1 951 aaKnown RBP10.49□□□□□ -0.73
CLDN1-201ENST00000295522 SMYD2Q9NRG4 433 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 SLC38A7Q9NVC3 462 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 ZNF219Q9P2Y4 722 aaPredicted RBP10.49□□□□□ -0.73
CLDN1-201ENST00000295522 WARS2Q9UGM6 360 aaKnown RBP10.49□□□□□ -0.73
CLDN1-201ENST00000295522 SERPINB13Q9UIV8 391 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 ITGA11Q9UKX5 1188 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 AURKCQ9UQB9 309 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 ATF5Q9Y2D1 282 aaPredicted RBP10.49□□□□□ -0.73
CLDN1-201ENST00000295522 SNCAIPQ9Y6H5 919 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 hCG_1818297A0A087WSY0 165 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 STAM2O75886 525 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 KCNH1O95259 989 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 CD19P15391 556 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 ZNF182P17025 639 aaPredicted RBP10.49□□□□□ -0.73
CLDN1-201ENST00000295522 ECE1P42892 770 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 TRMT10BQ6PF06 316 aaKnown RBP10.49□□□□□ -0.73
CLDN1-201ENST00000295522 TRIM72Q6ZMU5 477 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 SNX29P2Q8IUI4 249 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 C10orf107Q8IVU9 208 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 KYQ8NBH2 561 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 LRTOMTQ8WZ04 291 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 AGAP3Q96P47 875 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 SLX1AQ9BQ83 275 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 GLT8D2Q9H1C3 349 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 POLR1BQ9H9Y6 1135 aa10.49□□□□□ -0.73
CLDN1-201ENST00000295522 CD48P09326 243 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 TCEA1P23193 301 aaKnown RBP10.48□□□□□ -0.73
CLDN1-201ENST00000295522 ARL1P40616 181 aaPredicted RBP10.48□□□□□ -0.73
CLDN1-201ENST00000295522 HSPA13P48723 471 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 PRELPP51888 382 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 CACNB3P54284 484 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 SOX10P56693 466 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 SLC18A2Q05940 514 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 PRKG1Q13976 671 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 C1orf220Q5T0J3 134 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 IL23RQ5VWK5 629 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 ELMSAN1Q6PJG2 1045 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 ZBTB49Q6ZSB9 765 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 EMC1Q8N766 993 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 DDX1Q92499 740 aaKnown RBP10.48□□□□□ -0.73
CLDN1-201ENST00000295522 MBOAT7Q96N66 472 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 CXorf21Q9HAI6 301 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 TBC1D22BQ9NU19 505 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 VAV3Q9UKW4 847 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 LTBP4Q8N2S1 1624 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 GOLGA8TH3BQL2 631 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 KCNN4O15554 427 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 ATE1O95260 518 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 CSH1P0DML2 217 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 CSH2P0DML3 217 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 UNGP13051 313 aaPredicted RBP10.48□□□□□ -0.73
CLDN1-201ENST00000295522 ABCG1P45844 678 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 IREB2P48200 963 aaKnown RBP10.48□□□□□ -0.73
CLDN1-201ENST00000295522 CRADDP78560 199 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 FSTL1Q12841 308 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 KLF10Q13118 480 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 AP3B2Q13367 1082 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 CDO1Q16878 200 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 USP37Q86T82 979 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 UNC5BQ8IZJ1 945 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 NAT8LQ8N9F0 302 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 ADCY4Q8NFM4 1077 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 CERKQ8TCT0 537 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 MTG1Q9BT17 334 aaPredicted RBP10.48□□□□□ -0.73
CLDN1-201ENST00000295522 CCDC68Q9H2F9 335 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 NOL11Q9H8H0 719 aaKnown RBP10.48□□□□□ -0.73
CLDN1-201ENST00000295522 DDX56Q9NY93 547 aaKnown RBP10.48□□□□□ -0.73
CLDN1-201ENST00000295522 GPRC5DQ9NZD1 345 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 CNTN3Q9P232 1028 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 ATP11BQ9Y2G3 1177 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 ST14Q9Y5Y6 855 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 PLCH1Q4KWH8 1693 aa10.48□□□□□ -0.73
CLDN1-201ENST00000295522 AP1G1O43747 822 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms