RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 TARBP2Q15633 366 aaKnown RBP13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 HADHQ16836 314 aaKnown RBP13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 MAP7D1Q3KQU3 841 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 SH2D4BQ5SQS7 431 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 ANO7Q6IWH7 933 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 DPY19L2Q6NUT2 758 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 ACOT1Q86TX2 421 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 VPS52Q8N1B4 723 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 ZFAND2BQ8WV99 257 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 GRAMD1AQ96CP6 724 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 ZMAT2Q96NC0 199 aaKnown RBP13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 FDXACB1Q9BRP7 624 aaPredicted RBP13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 PLAC1Q9HBJ0 212 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 TAS2R1Q9NYW7 299 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 SEPT10Q9P0V9 454 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 MAGEB2O15479 319 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 ATP9BO43861 1147 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 MAFO75444 373 aaPredicted RBP13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 METTL18O95568 372 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 TROVE2P10155 538 aaKnown RBP eCLIP13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 CD1EP15812 388 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 PHBP35232 272 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 BAG6P46379 1132 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 NDST1P52848 882 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 TMPRSS15P98073 1019 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 PTPN11Q06124 597 aaPredicted RBP13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 MCL1Q07820 350 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 CASC4Q6P4E1 433 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 BBS12Q6ZW61 710 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 TP53INP2Q8IXH6 220 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 ANKRD49Q8WVL7 239 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 MCUR1Q96AQ8 359 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 ANKRD36BP1Q96IX9 119 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 SPATA33Q96N06 139 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 UROC1Q96N76 676 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 APOL6Q9BWW8 343 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 TRIM55Q9BYV6 548 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 TXNRD2Q9NNW7 524 aa13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 PPARGC1AQ9UBK2 798 aaKnown RBP13.73□□□□□ -0.21
KCNIP3-201ENST00000295225 CAPN9O14815 690 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 CUL3Q13618 768 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 THOC5Q13769 683 aaKnown RBP13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 CHI3L2Q15782 390 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 C10orf62Q5T681 223 aaPredicted RBP13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 CYP4V2Q6ZWL3 525 aaPredicted RBP13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 OTUD5Q96G74 571 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 CLMNQ96JQ2 1002 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 FAM161BQ96MY7 647 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 IER2Q9BTL4 223 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 TSPAN16Q9UKR8 245 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 TMED5Q9Y3A6 229 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 TNS1Q9HBL0 1735 aaKnown RBP13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 NFASCO94856 1347 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 PSME4Q14997 1843 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 POLR2AP24928 1970 aaKnown RBP13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 FCHO1O14526 889 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 ZMPSTE24O75844 475 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 PDGFRBP09619 1106 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 STAG3L1P0CL83 205 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 ENDOUP21128 410 aaKnown RBP13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 SERPINB4P48594 390 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 ZNF280AP59817 542 aaPredicted RBP13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 YWHAEP62258 255 aaKnown RBP13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 BST1Q10588 318 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 CAPRIN2Q6IMN6 1127 aaKnown RBP13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 PMF1Q6P1K2 205 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 RIBC1Q8N443 379 aaPredicted RBP13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 SEPT1Q8WYJ6 367 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 KLRG1Q96E93 195 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 RPF1Q9H9Y2 349 aaKnown RBP13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 DDX56Q9NY93 547 aaKnown RBP13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 ZC3H7BQ9UGR2 993 aaKnown RBP13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 SLC24A2Q9UI40 661 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 CARD8Q9Y2G2 431 aa13.72□□□□□ -0.21
KCNIP3-201ENST00000295225 DCAF8L1A6NGE4 600 aa13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 COPEO14579 308 aa13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 GSC2O15499 205 aa13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 TBX10O75333 385 aa13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 ZWINTO95229 277 aa13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 DLDP09622 509 aaKnown RBP13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 ZNF286BP0CG31 522 aa13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 ESRRAP11474 423 aaPredicted RBP13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 PTPN4P29074 926 aa13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 GPD2P43304 727 aa13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 YWHAZP63104 245 aaKnown RBP13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 MRPS5P82675 430 aaKnown RBP13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 PDAP1Q13442 181 aaKnown RBP13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 C4orf50Q6ZRC1 276 aa13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 C14orf80Q86SX3 495 aa13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 TDRPQ86YL5 185 aa13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 RILPQ96NA2 401 aa13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 SYT15Q9BQS2 421 aa13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 ETNK2Q9NVF9 386 aa13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 ZNF358Q9NW07 568 aa13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 NMRK1Q9NWW6 199 aa13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 CACNG4Q9UBN1 327 aa13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 B2RBV5 119 aa13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 H0YCG3 227 aa13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 C2CD2LO14523 706 aa13.71□□□□□ -0.21
KCNIP3-201ENST00000295225 KRT7P08729 469 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms