RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 COX16Q9P0S2 106 aa20.62■□□□□ 0.89
SCUBE1-201ENST00000290460 KPNA7A9QM74 516 aa20.62■□□□□ 0.89
SCUBE1-201ENST00000290460 EPHX2P34913 555 aa20.62■□□□□ 0.89
SCUBE1-201ENST00000290460 SMAD1Q15797 465 aaKnown RBP20.62■□□□□ 0.89
SCUBE1-201ENST00000290460 LDLRAD1Q5T700 205 aa20.62■□□□□ 0.89
SCUBE1-201ENST00000290460 TTC8Q8TAM2 541 aa20.62■□□□□ 0.89
SCUBE1-201ENST00000290460 TMEM40Q8WWA1 233 aa20.62■□□□□ 0.89
SCUBE1-201ENST00000290460 MAML3Q96JK9 1138 aa20.62■□□□□ 0.89
SCUBE1-201ENST00000290460 ZNF570Q96NI8 536 aa20.62■□□□□ 0.89
SCUBE1-201ENST00000290460 LNPEPQ9UIQ6 1025 aa20.62■□□□□ 0.89
SCUBE1-201ENST00000290460 DOCK3Q8IZD9 2030 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 SMIM28A0A1B0GU29 152 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 BTBD19C9JJ37 291 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 ENTPD5O75356 428 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 TGDSO95455 350 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 TPSB2P20231 275 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 SOX4Q06945 474 aaPredicted RBP20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 BST1Q10588 318 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 TPSAB1Q15661 275 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 C9orf131Q5VYM1 1079 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 RFWD3Q6PCD5 774 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 GPR142Q7Z601 462 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 FAM149B1Q96BN6 582 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 LRRC39Q96DD0 335 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 OXNAD1Q96HP4 312 aaPredicted RBP20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 DENND2DQ9H6A0 471 aaPredicted RBP20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 PIN4Q9Y237 131 aaKnown RBP20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 USP3Q9Y6I4 520 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 FAM159BA6NKW6 160 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 ZNF487B1APH4 448 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 PIRO00625 290 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 HOXD8P13378 290 aaPredicted RBP20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 NR2C2P49116 596 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 TMPRSS15P98073 1019 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 HIC1Q14526 733 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 LGSNQ5TDP6 509 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 ALYREFQ86V81 257 aaKnown RBP20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 PTCD3Q96EY7 689 aaKnown RBP20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 CADM1Q9BY67 442 aaKnown RBP20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 SNX25Q9H3E2 840 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 RNPEPL1Q9HAU8 725 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 ARMCX1Q9P291 453 aa20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 UBQLN1Q9UMX0 589 aaKnown RBP20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 MTO1Q9Y2Z2 717 aaKnown RBP20.61■□□□□ 0.89
SCUBE1-201ENST00000290460 WDR27A2RRH5 827 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 H0Y3Z8 333 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 MFSD11O43934 449 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 KRT38O76015 456 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 SMIM10L2AP0DMW4 78 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 SMIM10L2BP0DMW5 78 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 ZFXP17010 805 aaPredicted RBP20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 CCNFP41002 786 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 CHI3L2Q15782 390 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 NBPF20Q3BBV1 942 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 CASC4Q6P4E1 433 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 DEFB106AQ8N104 65 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 NDUFAF2Q8N183 169 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 CRYBG2Q8N1P7 616 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 DEPDC1BQ8WUY9 529 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 HTR3CQ8WXA8 447 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 LENG1Q96BZ8 264 aaPredicted RBP20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 RSRC1Q96IZ7 334 aaKnown RBP20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 PCDHA11Q9Y5I1 949 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 DARSP14868 501 aaKnown RBP20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 SULT1E1P49888 294 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 ADIGQ0VDE8 80 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 SEMA5AQ13591 1074 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 ANKRD20A2Q5SQ80 823 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 PRAMEF19Q5SWL8 479 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 ANKRD20A1Q5TYW2 823 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 ANKRD20A3Q5VUR7 823 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 USP50Q70EL3 339 aaPredicted RBP20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 APBB1IPQ7Z5R6 666 aaPredicted RBP20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 TFB1MQ8WVM0 346 aaKnown RBP20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 NUDCD1Q96RS6 583 aa20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 MARCOQ9UEW3 520 aaPredicted RBP20.6■□□□□ 0.89
SCUBE1-201ENST00000290460 CLDN5O00501 218 aa20.59■□□□□ 0.89
SCUBE1-201ENST00000290460 KLF11O14901 512 aa20.59■□□□□ 0.89
SCUBE1-201ENST00000290460 DYNC1LI2O43237 492 aaPredicted RBP20.59■□□□□ 0.89
SCUBE1-201ENST00000290460 STRNO43815 780 aa20.59■□□□□ 0.89
SCUBE1-201ENST00000290460 KITP10721 976 aa20.59■□□□□ 0.89
SCUBE1-201ENST00000290460 CYP2C9P11712 490 aa20.59■□□□□ 0.89
SCUBE1-201ENST00000290460 CLNS1AP54105 237 aaKnown RBP20.59■□□□□ 0.89
SCUBE1-201ENST00000290460 IRX4P78413 519 aa20.59■□□□□ 0.89
SCUBE1-201ENST00000290460 BSPRYQ5W0U4 402 aa20.59■□□□□ 0.89
SCUBE1-201ENST00000290460 ZNF467Q7Z7K2 595 aaPredicted RBP20.59■□□□□ 0.89
SCUBE1-201ENST00000290460 PIGZQ86VD9 579 aa20.59■□□□□ 0.89
SCUBE1-201ENST00000290460 PDCD7Q8N8D1 485 aaKnown RBP20.59■□□□□ 0.89
SCUBE1-201ENST00000290460 APPL2Q8NEU8 664 aa20.59■□□□□ 0.89
SCUBE1-201ENST00000290460 DNAJB3Q8WWF6 145 aa20.59■□□□□ 0.89
SCUBE1-201ENST00000290460 E2F7Q96AV8 911 aa20.59■□□□□ 0.89
SCUBE1-201ENST00000290460 OLFM3Q96PB7 478 aa20.59■□□□□ 0.89
SCUBE1-201ENST00000290460 TINF2Q9BSI4 451 aa20.59■□□□□ 0.89
SCUBE1-201ENST00000290460 NMUR2Q9GZQ4 415 aa20.59■□□□□ 0.89
SCUBE1-201ENST00000290460 TLE6Q9H808 572 aa20.59■□□□□ 0.89
SCUBE1-201ENST00000290460 CEP350Q5VT06 3117 aa20.59■□□□□ 0.89
SCUBE1-201ENST00000290460 CCL15-CCL14A0A0B4J2E2 113 aa20.58■□□□□ 0.89
SCUBE1-201ENST00000290460 I3L4J1 428 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms