RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 BCCIPQ9P287 314 aaKnown RBP eCLIP10.95□□□□□ -0.66
SNF8-201ENST00000290330 SFMBT1Q9UHJ3 866 aa10.95□□□□□ -0.66
SNF8-201ENST00000290330 RWDD2AQ9UIY3 292 aa10.95□□□□□ -0.66
SNF8-201ENST00000290330 SLC27A6Q9Y2P4 619 aa10.95□□□□□ -0.66
SNF8-201ENST00000290330 DNAH14Q0VDD8 3507 aa10.95□□□□□ -0.66
SNF8-201ENST00000290330 FRYLO94915 3013 aa10.95□□□□□ -0.66
SNF8-201ENST00000290330 M0QYV0 167 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 FGFR1OPO95684 399 aaKnown RBP10.94□□□□□ -0.66
SNF8-201ENST00000290330 CAVIN2O95810 425 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 CALCAP01258 141 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 LCP1P13796 627 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 GABRG2P18507 467 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 RGS7P49802 495 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 LIMK1P53667 647 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 DAOAP59103 153 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 STILQ15468 1287 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 MAP7D1Q3KQU3 841 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 TCEAL6Q6IPX3 200 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 SDE2Q6IQ49 451 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 FMNL3Q8IVF7 1028 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 FAM217AQ8IXS0 508 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 PGBD3Q8N328 593 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 RNF139Q8WU17 664 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 TCEAL3Q969E4 200 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 PLD4Q96BZ4 506 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 HSFY1Q96LI6 401 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 GABRG3Q99928 467 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 INTS2Q9H0H0 1204 aaKnown RBP10.94□□□□□ -0.66
SNF8-201ENST00000290330 CD248Q9HCU0 757 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 ABCC13Q9NSE7 274 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 TMEM63CQ9P1W3 806 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 CNTN6Q9UQ52 1028 aa10.94□□□□□ -0.66
SNF8-201ENST00000290330 SPAG17Q6Q759 2223 aa10.93□□□□□ -0.66
SNF8-201ENST00000290330 WASH3PC4AMC7 463 aa10.93□□□□□ -0.66
SNF8-201ENST00000290330 GFRA2O00451 464 aa10.93□□□□□ -0.66
SNF8-201ENST00000290330 PIK3R2O00459 728 aa10.93□□□□□ -0.66
SNF8-201ENST00000290330 TM4SF5O14894 197 aa10.93□□□□□ -0.66
SNF8-201ENST00000290330 CYBBP04839 570 aa10.93□□□□□ -0.66
SNF8-201ENST00000290330 HARS2P49590 506 aaKnown RBP10.93□□□□□ -0.66
SNF8-201ENST00000290330 MFAP3P55082 362 aa10.93□□□□□ -0.66
SNF8-201ENST00000290330 BYSLQ13895 437 aaKnown RBP10.93□□□□□ -0.66
SNF8-201ENST00000290330 GEN1Q17RS7 908 aa10.93□□□□□ -0.66
SNF8-201ENST00000290330 KIAA1211LQ6NV74 962 aa10.93□□□□□ -0.66
SNF8-201ENST00000290330 IPO4Q8TEX9 1081 aaKnown RBP10.93□□□□□ -0.66
SNF8-201ENST00000290330 IRGQQ8WZA9 623 aa10.93□□□□□ -0.66
SNF8-201ENST00000290330 PIWIL1Q96J94 861 aaKnown RBP10.93□□□□□ -0.66
SNF8-201ENST00000290330 SPACA7Q96KW9 195 aa10.93□□□□□ -0.66
SNF8-201ENST00000290330 TSPY26PQ9H489 355 aa10.93□□□□□ -0.66
SNF8-201ENST00000290330 UBE2TQ9NPD8 197 aaPredicted RBP10.93□□□□□ -0.66
SNF8-201ENST00000290330 CACNA2D2Q9NY47 1150 aa10.93□□□□□ -0.66
SNF8-201ENST00000290330 CALCOCO1Q9P1Z2 691 aa10.93□□□□□ -0.66
SNF8-201ENST00000290330 MBD1Q9UIS9 605 aaPredicted RBP10.93□□□□□ -0.66
SNF8-201ENST00000290330 STOML2Q9UJZ1 356 aa10.93□□□□□ -0.66
SNF8-201ENST00000290330 CLEC4EQ9ULY5 219 aa10.93□□□□□ -0.66
SNF8-201ENST00000290330 HBS1LQ9Y450 684 aaKnown RBP10.93□□□□□ -0.66
SNF8-201ENST00000290330 RALGAPA1Q6GYQ0 2036 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 CACNA1AO00555 2505 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 MAP3K13O43283 966 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 MSI1O43347 362 aaKnown RBP10.92□□□□□ -0.66
SNF8-201ENST00000290330 KRT5P13647 590 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 GPD2P43304 727 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 RPL34P49207 117 aaKnown RBP10.92□□□□□ -0.66
SNF8-201ENST00000290330 DHPSP49366 369 aaPredicted RBP10.92□□□□□ -0.66
SNF8-201ENST00000290330 ADGRF1Q5T601 910 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 STPG1Q5TH74 334 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 MSANTD2Q6P1R3 559 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 TRIM65Q6PJ69 517 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 LPCAT2Q7L5N7 544 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 CYP2U1Q7Z449 544 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 IRF2BP1Q8IU81 584 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 CREBRFQ8IUR6 639 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 TMEFF1Q8IYR6 380 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 ABCA7Q8IZY2 2146 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 MLKLQ8NB16 471 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 CLEC4CQ8WTT0 213 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 DDI1Q8WTU0 396 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 CRACR2AQ9BSW2 395 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 SLC2A11Q9BYW1 496 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 MIS12Q9H081 205 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 RAD54BQ9Y620 910 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 STON1Q9Y6Q2 735 aa10.92□□□□□ -0.66
SNF8-201ENST00000290330 MYO18AQ92614 2054 aaKnown RBP10.92□□□□□ -0.66
SNF8-201ENST00000290330 LNP1A1A4G5 178 aa10.91□□□□□ -0.66
SNF8-201ENST00000290330 SYCE3A1L190 88 aa10.91□□□□□ -0.66
SNF8-201ENST00000290330 PATE3B3GLJ2 98 aa10.91□□□□□ -0.66
SNF8-201ENST00000290330 KHNYNO15037 678 aaKnown RBP10.91□□□□□ -0.66
SNF8-201ENST00000290330 ZBTB24O43167 697 aaPredicted RBP10.91□□□□□ -0.66
SNF8-201ENST00000290330 FBXO21O94952 628 aa10.91□□□□□ -0.66
SNF8-201ENST00000290330 LATS1O95835 1130 aa10.91□□□□□ -0.66
SNF8-201ENST00000290330 IGLV3-27P01718 113 aa10.91□□□□□ -0.66
SNF8-201ENST00000290330 LTFP02788 710 aa10.91□□□□□ -0.66
SNF8-201ENST00000290330 FYNP06241 537 aa10.91□□□□□ -0.66
SNF8-201ENST00000290330 NDUFV2P19404 249 aa10.91□□□□□ -0.66
SNF8-201ENST00000290330 SLC9A1P19634 815 aa10.91□□□□□ -0.66
SNF8-201ENST00000290330 HOXD9P28356 352 aaPredicted RBP10.91□□□□□ -0.66
SNF8-201ENST00000290330 PTGER3P43115 390 aa10.91□□□□□ -0.66
SNF8-201ENST00000290330 ENPP2Q13822 863 aa10.91□□□□□ -0.66
SNF8-201ENST00000290330 MPPE1Q53F39 396 aa10.91□□□□□ -0.66
SNF8-201ENST00000290330 PPM1JQ5JR12 505 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms