RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 SLC27A6Q9Y2P4 619 aa14.71□□□□□ -0.05
TPM1-202ENST00000288398 PSMA7O14818 248 aa14.7□□□□□ -0.06
TPM1-202ENST00000288398 XPO1O14980 1071 aaKnown RBP14.7□□□□□ -0.06
TPM1-202ENST00000288398 PENKP01210 267 aaPredicted RBP14.7□□□□□ -0.06
TPM1-202ENST00000288398 CISD3P0C7P0 127 aa14.7□□□□□ -0.06
TPM1-202ENST00000288398 PRCPP42785 496 aa14.7□□□□□ -0.06
TPM1-202ENST00000288398 LRRC63Q05C16 580 aa14.7□□□□□ -0.06
TPM1-202ENST00000288398 BST2Q10589 180 aaKnown RBP14.7□□□□□ -0.06
TPM1-202ENST00000288398 CETN1Q12798 172 aa14.7□□□□□ -0.06
TPM1-202ENST00000288398 BECN1Q14457 450 aa14.7□□□□□ -0.06
TPM1-202ENST00000288398 EIF4HQ15056 248 aaKnown RBP14.7□□□□□ -0.06
TPM1-202ENST00000288398 PLEKHG6Q3KR16 790 aa14.7□□□□□ -0.06
TPM1-202ENST00000288398 GOLGA1Q92805 767 aa14.7□□□□□ -0.06
TPM1-202ENST00000288398 MRGPRX1Q96LB2 322 aa14.7□□□□□ -0.06
TPM1-202ENST00000288398 ULBP1Q9BZM6 244 aa14.7□□□□□ -0.06
TPM1-202ENST00000288398 TSPAN16Q9UKR8 245 aa14.7□□□□□ -0.06
TPM1-202ENST00000288398 LAMA1P25391 3075 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 KLKB1P03952 638 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 SETSIPP0DME0 302 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 CD6P30203 668 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 MFAP3P55082 362 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 ZNF445P59923 1031 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 PDE4CQ08493 712 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 ADIGQ0VDE8 80 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 LRMPQ12912 555 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 CCDC40Q4G0X9 1142 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 MPPE1Q53F39 396 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 RAB41Q5JT25 222 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 FYB2Q5VWT5 728 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 PEAR1Q5VY43 1037 aaPredicted RBP14.69□□□□□ -0.06
TPM1-202ENST00000288398 SERPINA13PQ6UXR4 307 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 FMNL3Q8IVF7 1028 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 CPXM2Q8N436 756 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 MINDY1Q8N5J2 469 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 PRCCQ92733 491 aaPredicted RBP14.69□□□□□ -0.06
TPM1-202ENST00000288398 TATDN2Q93075 761 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 SLC2A11Q9BYW1 496 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 SLC6A17Q9H1V8 727 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 METTL14Q9HCE5 456 aaKnown RBP14.69□□□□□ -0.06
TPM1-202ENST00000288398 HCN2Q9UL51 889 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 KIAA1257Q9ULG3 409 aa14.69□□□□□ -0.06
TPM1-202ENST00000288398 MAP1BP46821 2468 aaKnown RBP14.68□□□□□ -0.06
TPM1-202ENST00000288398 WASH3PC4AMC7 463 aa14.68□□□□□ -0.06
TPM1-202ENST00000288398 ARHGAP33O14559 1287 aa14.68□□□□□ -0.06
TPM1-202ENST00000288398 TIMM44O43615 452 aa14.68□□□□□ -0.06
TPM1-202ENST00000288398 VDRP11473 427 aa14.68□□□□□ -0.06
TPM1-202ENST00000288398 OXTRP30559 389 aa14.68□□□□□ -0.06
TPM1-202ENST00000288398 PPP1R2P41236 205 aa14.68□□□□□ -0.06
TPM1-202ENST00000288398 SIM1P81133 766 aaPredicted RBP14.68□□□□□ -0.06
TPM1-202ENST00000288398 HNRNPDQ14103 355 aaKnown RBP14.68□□□□□ -0.06
TPM1-202ENST00000288398 GEN1Q17RS7 908 aa14.68□□□□□ -0.06
TPM1-202ENST00000288398 FUT11Q495W5 492 aa14.68□□□□□ -0.06
TPM1-202ENST00000288398 CBWD6Q4V339 395 aa14.68□□□□□ -0.06
TPM1-202ENST00000288398 CBWD3Q5JTY5 395 aa14.68□□□□□ -0.06
TPM1-202ENST00000288398 CBWD5Q5RIA9 395 aa14.68□□□□□ -0.06
TPM1-202ENST00000288398 UNQ6494/PRO21346Q6UXR6 183 aa14.68□□□□□ -0.06
TPM1-202ENST00000288398 SIPA1Q96FS4 1042 aa14.68□□□□□ -0.06
TPM1-202ENST00000288398 FSCN3Q9NQT6 498 aa14.68□□□□□ -0.06
TPM1-202ENST00000288398 ABCC13Q9NSE7 274 aa14.68□□□□□ -0.06
TPM1-202ENST00000288398 ELOVL2Q9NXB9 296 aa14.68□□□□□ -0.06
TPM1-202ENST00000288398 THAP10Q9P2Z0 257 aaPredicted RBP14.68□□□□□ -0.06
TPM1-202ENST00000288398 FBXO10Q9UK96 956 aa14.68□□□□□ -0.06
TPM1-202ENST00000288398 PLA2G4CQ9UP65 541 aa14.68□□□□□ -0.06
TPM1-202ENST00000288398 HBS1LQ9Y450 684 aaKnown RBP14.68□□□□□ -0.06
TPM1-202ENST00000288398 PCDHB9Q9Y5E1 797 aa14.68□□□□□ -0.06
TPM1-202ENST00000288398 CEP295Q9C0D2 2601 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 PLXND1Q9Y4D7 1925 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 EPHX1P07099 455 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 PROS1P07225 676 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 NCAM1P13591 858 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 LCP1P13796 627 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 IL12RB1P42701 662 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 ZNF234Q14588 700 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 FNDC3BQ53EP0 1204 aaKnown RBP14.67□□□□□ -0.06
TPM1-202ENST00000288398 COBLL1Q53SF7 1204 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 ANKRD40Q6AI12 368 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 PM20D1Q6GTS8 502 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 METTL3Q86U44 580 aaKnown RBP14.67□□□□□ -0.06
TPM1-202ENST00000288398 SLC41A1Q8IVJ1 513 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 CCDC117Q8IWD4 279 aaPredicted RBP14.67□□□□□ -0.06
TPM1-202ENST00000288398 FMR1NBQ8N0W7 255 aaPredicted RBP14.67□□□□□ -0.06
TPM1-202ENST00000288398 UBA3Q8TBC4 463 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 WFIKKN2Q8TEU8 576 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 EDEM1Q92611 657 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 TOE1Q96GM8 510 aaKnown RBP14.67□□□□□ -0.06
TPM1-202ENST00000288398 ZNF419Q96HQ0 510 aaPredicted RBP14.67□□□□□ -0.06
TPM1-202ENST00000288398 NT5C1BQ96P26 610 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 GPR174Q9BXC1 333 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 ADAM33Q9BZ11 813 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 ZDHHC5Q9C0B5 715 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 MIR1-1HGQ9H1L0 117 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 CAPN10Q9HC96 672 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 COQ4Q9Y3A0 265 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 PCDHB4Q9Y5E5 795 aa14.67□□□□□ -0.06
TPM1-202ENST00000288398 KMT2BQ9UMN6 2715 aaPredicted RBP14.66□□□□□ -0.06
TPM1-202ENST00000288398 MYO18AQ92614 2054 aaKnown RBP14.66□□□□□ -0.06
TPM1-202ENST00000288398 TYW5A2RUC4 315 aaKnown RBP14.66□□□□□ -0.06
TPM1-202ENST00000288398 UPK3BL1B0FP48 263 aa14.66□□□□□ -0.06
TPM1-202ENST00000288398 UPK3BL2E5RIL1 263 aa14.66□□□□□ -0.06
TPM1-202ENST00000288398 H0Y626 953 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms