RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 PTPN20Q4JDL3 420 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 LY6G5CQ5SRR4 150 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 SYPL2Q5VXT5 272 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 PKN3Q6P5Z2 889 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 DDX42Q86XP3 938 aaKnown RBP eCLIP9.58□□□□□ -0.884e-6■□□□□ 10.9
HMGN1-201ENST00000288344 C1orf210Q8IVY1 113 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 SFTPA1Q8IWL2 248 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 ARHGAP18Q8N392 663 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 SYNPOQ8N3V7 929 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 FAM160A2Q8N612 972 aaPredicted RBP9.58□□□□□ -0.88
HMGN1-201ENST00000288344 CSGALNACT1Q8TDX6 532 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 ATP2A3Q93084 1043 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 AZIN2Q96A70 460 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 SLC2A13Q96QE2 648 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 PCDHB18PQ96TA0 734 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 MFSD1Q9H3U5 465 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 LRRC4Q9HBW1 653 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 PRMT8Q9NR22 394 aaPredicted RBP9.58□□□□□ -0.88
HMGN1-201ENST00000288344 ABCC13Q9NSE7 274 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 RBM12Q9NTZ6 932 aaKnown RBP9.58□□□□□ -0.88
HMGN1-201ENST00000288344 TBC1D14Q9P2M4 693 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 MRPS17Q9Y2R5 130 aaKnown RBP9.58□□□□□ -0.88
HMGN1-201ENST00000288344 EP300Q09472 2414 aaPredicted RBP9.58□□□□□ -0.88
HMGN1-201ENST00000288344 A0A1W2PQC6 194 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 TCRBV5S1A1TA0A578 114 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 SMTNL1A8MU46 457 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 CHURC1-FNTBB4DL54 471 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 PIK3R2O00459 728 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 SLC9A3R1O14745 358 aaPredicted RBP9.57□□□□□ -0.88
HMGN1-201ENST00000288344 SCAMP3O14828 347 aaKnown RBP9.57□□□□□ -0.88
HMGN1-201ENST00000288344 THAP12O43422 761 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 MED7O43513 233 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 CLSTN1O94985 981 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 CAVIN2O95810 425 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 F12P00748 615 aaPredicted RBP9.57□□□□□ -0.88
HMGN1-201ENST00000288344 EGFP01133 1207 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 PENKP01210 267 aaPredicted RBP9.57□□□□□ -0.88
HMGN1-201ENST00000288344 LTFP02788 710 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 UNGP13051 313 aaPredicted RBP9.57□□□□□ -0.88
HMGN1-201ENST00000288344 LCP1P13796 627 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 PTMSP20962 102 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 HOXA6P31267 233 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 SOX5P35711 763 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 EIF2DP41214 584 aaKnown RBP9.57□□□□□ -0.88
HMGN1-201ENST00000288344 ACADSBP45954 432 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 KPNA1P52294 538 aaPredicted RBP9.57□□□□□ -0.88
HMGN1-201ENST00000288344 SLC8A3P57103 927 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 BPIFB4P59827 614 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 POLR2FP61218 127 aaKnown RBP9.57□□□□□ -0.88
HMGN1-201ENST00000288344 PITX1P78337 314 aaPredicted RBP9.57□□□□□ -0.88
HMGN1-201ENST00000288344 COG7P83436 770 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 FMO1Q01740 532 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 UBXN1Q04323 297 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 UBXN2BQ14CS0 331 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 ZNF528Q3MIS6 628 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 DGKKQ5KSL6 1271 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 C10orf120Q5SQS8 335 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 OTUD1Q5VV17 481 aaPredicted RBP9.57□□□□□ -0.88
HMGN1-201ENST00000288344 FYB2Q5VWT5 728 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 CC2D1AQ6P1N0 951 aaPredicted RBP9.57□□□□□ -0.88
HMGN1-201ENST00000288344 OLFML1Q6UWY5 402 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 Q6ZS52 159 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 LUZP1Q86V48 1076 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 CPXM2Q8N436 756 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 ZNF397Q8NF99 534 aaPredicted RBP9.57□□□□□ -0.88
HMGN1-201ENST00000288344 EDEM1Q92611 657 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 LMLNQ96KR4 655 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 CDK5RAP1Q96SZ6 601 aaKnown RBP9.57□□□□□ -0.88
HMGN1-201ENST00000288344 NAT10Q9H0A0 1025 aaKnown RBP9.57□□□□□ -0.88
HMGN1-201ENST00000288344 CD248Q9HCU0 757 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 SPHK2Q9NRA0 654 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 FAM207AQ9NSI2 230 aaPredicted RBP9.57□□□□□ -0.88
HMGN1-201ENST00000288344 ASNSD1Q9NWL6 643 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 MARCH2Q9P0N8 246 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 CALCOCO1Q9P1Z2 691 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 SFMBT1Q9UHJ3 866 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 AGO1Q9UL18 857 aaKnown RBP9.57□□□□□ -0.88
HMGN1-201ENST00000288344 NAALADL1Q9UQQ1 740 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 HBS1LQ9Y450 684 aaKnown RBP9.57□□□□□ -0.88
HMGN1-201ENST00000288344 DNAH14Q0VDD8 3507 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 GVINP1Q7Z2Y8 2422 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 FAM186AA6NE01 2351 aa9.57□□□□□ -0.88
HMGN1-201ENST00000288344 H0Y858 1186 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 I6L893 689 aaPredicted RBP9.56□□□□□ -0.88
HMGN1-201ENST00000288344 TRIM24O15164 1050 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 LILRB5O75023 590 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 NFATC1O95644 943 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 ERBB2P04626 1255 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 GLI1P08151 1106 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 MMEP08473 750 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 SP9P0CG40 484 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 RALAP11233 206 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 DRD1P21728 446 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 NBL1P41271 181 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 KIR2DL1P43626 348 aaPredicted RBP9.56□□□□□ -0.88
HMGN1-201ENST00000288344 IFNAR2P48551 515 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 NOMO3P69849 1222 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 CDR2Q01850 454 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 RING1Q06587 406 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 EFEMP1Q12805 493 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms