RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 GMPSP49915 693 aaPredicted RBP13.68□□□□□ -0.22
SLC28A1-201ENST00000286749 SARNPP82979 210 aaKnown RBP13.68□□□□□ -0.22
SLC28A1-201ENST00000286749 SLC25A3Q00325 362 aa13.68□□□□□ -0.22
SLC28A1-201ENST00000286749 GBE1Q04446 702 aa13.68□□□□□ -0.22
SLC28A1-201ENST00000286749 GOLGA7BQ2TAP0 167 aa13.68□□□□□ -0.22
SLC28A1-201ENST00000286749 LCLAT1Q6UWP7 414 aa13.68□□□□□ -0.22
SLC28A1-201ENST00000286749 GALNT15Q8N3T1 639 aa13.68□□□□□ -0.22
SLC28A1-201ENST00000286749 POU5F2Q8N7G0 328 aa13.68□□□□□ -0.22
SLC28A1-201ENST00000286749 FGD4Q96M96 766 aa13.68□□□□□ -0.22
SLC28A1-201ENST00000286749 TRAPPC9Q96Q05 1148 aa13.68□□□□□ -0.22
SLC28A1-201ENST00000286749 NR1H4Q96RI1 486 aaPredicted RBP13.68□□□□□ -0.22
SLC28A1-201ENST00000286749 GPR20Q99678 358 aa13.68□□□□□ -0.22
SLC28A1-201ENST00000286749 C1orf21Q9H246 121 aa13.68□□□□□ -0.22
SLC28A1-201ENST00000286749 BARX2Q9UMQ3 279 aaPredicted RBP13.68□□□□□ -0.22
SLC28A1-201ENST00000286749 SOX13Q9UN79 622 aa13.68□□□□□ -0.22
SLC28A1-201ENST00000286749 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 ARHGAP42A6NI28 874 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 NOP56O00567 594 aaKnown RBP13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 GSRP00390 522 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 P4HA1P13674 534 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 AOC1P19801 751 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 EDNRBP24530 442 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 ADORA2AP29274 412 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 SDC4P31431 198 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 POLE2P56282 527 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 PDE1BQ01064 536 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 CDC16Q13042 620 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 TUBB3Q13509 450 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 HIC1Q14526 733 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 MBLAC2Q68D91 279 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 OLFML1Q6UWY5 402 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 KYAT3Q6YP21 454 aaKnown RBP13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 WDR75Q8IWA0 830 aaKnown RBP13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 CAMKK2Q96RR4 588 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 PPP1R16BQ96T49 567 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 NRDE2Q9H7Z3 1164 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 GPAMQ9HCL2 828 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 EMCNQ9ULC0 261 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 NR2E3Q9Y5X4 410 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 ATP5BP06576 529 aaKnown RBP13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 TFE3P19532 575 aaPredicted RBP13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 KCNA4P22459 653 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 ATICP31939 592 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 CRADDP78560 199 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 ROR2Q01974 943 aaKnown RBP13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 SLC10A2Q12908 348 aaPredicted RBP13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 TEDDM1Q5T9Z0 273 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 N4BP2L1Q5TBK1 243 aaPredicted RBP13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 TMCO4Q5TGY1 634 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 EFCAB12Q6NXP0 572 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 PMF1Q6P1K2 205 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 RAPH1Q70E73 1250 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 MFN1Q8IWA4 741 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 PIWIL2Q8TC59 973 aaKnown RBP13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 GBP5Q96PP8 586 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 ZNF670Q9BS34 389 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 MAGEB5Q9BZ81 275 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 MAF1Q9H063 256 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 STK32BQ9NY57 414 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 BTBD7Q9P203 1132 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 PDP2Q9P2J9 529 aa13.67□□□□□ -0.22
SLC28A1-201ENST00000286749 WDR27A2RRH5 827 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 DPYSL4O14531 572 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 GCATO75600 419 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 FGF3P11487 239 aaPredicted RBP13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 TPSB2P20231 275 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 CRABP2P29373 138 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 PRKG1Q13976 671 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 TPSAB1Q15661 275 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 SMAD1Q15797 465 aaKnown RBP13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 RALGPS1Q5JS13 557 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 AP1ARQ63HQ0 302 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 SCUBE3Q8IX30 993 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 PYDC1Q8WXC3 89 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 TUBGCP5Q96RT8 1024 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 MIS12Q9H081 205 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 DNAJB4Q9UDY4 337 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 CITO14578 2027 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 MCM3APO60318 1980 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 TPP1O14773 563 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 BUD23O43709 281 aaKnown RBP13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 SNUPNO95149 360 aaKnown RBP13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 ALDOAP04075 364 aaKnown RBP13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 TGFB3P10600 412 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 SLC1A6P48664 564 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 HDAC4P56524 1084 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 INCA1Q0VD86 236 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 RABGAP1LQ5R372 815 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 TREML2Q5T2D2 321 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 CASC4Q6P4E1 433 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 TIFABQ6ZNK6 161 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 DENND5BQ6ZUT9 1274 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 NCAPG2Q86XI2 1143 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 KHSRPQ92945 711 aaKnown RBP eCLIP13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 CPB2Q96IY4 423 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 TBCBQ99426 244 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 SHCBP1LQ9BZQ2 653 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 VRTNQ9H8Y1 702 aa13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 PIH1D1Q9NWS0 290 aaKnown RBP13.66□□□□□ -0.22
SLC28A1-201ENST00000286749 MOCS1Q9NZB8 636 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms