RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 EXOC2Q96KP1 924 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 BCO2Q9BYV7 579 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 POPDC2Q9HBU9 364 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 UBN1Q9NPG3 1134 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 SLC4A7Q9Y6M7 1214 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 RLFQ13129 1914 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 TARSL2A2RTX5 802 aaKnown RBP9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 FOXO6A8MYZ6 492 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 FGBP02675 491 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 LRG1P02750 347 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 PECAM1P16284 738 aaPredicted RBP9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 YWHAQP27348 245 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 RBL1P28749 1068 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 CTCFP49711 727 aaPredicted RBP9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 ADAM17P78536 824 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 FAAP100Q0VG06 881 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 NFE2Q16621 373 aaPredicted RBP9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 INTS6LQ5JSJ4 861 aaKnown RBP9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 PLEKHA7Q6IQ23 1121 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 FBXO46Q6PJ61 603 aaPredicted RBP9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 KCNT2Q6UVM3 1135 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 RAPH1Q70E73 1250 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 GSTCDQ8NEC7 633 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 ARNTL2Q8WYA1 636 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 SMOQ99835 787 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 ERP44Q9BS26 406 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 HERPUD2Q9BSE4 406 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 FAM8A1Q9UBU6 413 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 CDH9Q9ULB4 789 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 RRP15Q9Y3B9 282 aaKnown RBP9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 GOLGA8TH3BQL2 631 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 SASH3O75995 380 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 GNRH1P01148 92 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 KDELR1P24390 212 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 RPL21P46778 160 aaKnown RBP9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 RASSF2P50749 326 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 MRPS5P82675 430 aaKnown RBP9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 CBX2Q14781 532 aaPredicted RBP9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 RAP1GAP2Q684P5 730 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 C11orf63Q6NUN7 778 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 TTC27Q6P3X3 843 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 LRRC31Q6UY01 552 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 FIBCD1Q8N539 461 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 SLC25A41Q8N5S1 370 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 TOP6BLQ8N6T0 577 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 GLIS1Q8NBF1 620 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 ING5Q8WYH8 240 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 CYP2S1Q96SQ9 504 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 RBM15Q96T37 977 aaKnown RBP eCLIP9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 GKN1Q9NS71 199 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 CXCL14O95715 111 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 JCHAINP01591 159 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 F7P08709 466 aaPredicted RBP9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 ATXN8OSP0DMR3 200 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 RPL9P32969 192 aaKnown RBP9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 ZNF143P52747 638 aaPredicted RBP9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 TAP1Q03518 808 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 LRRC14Q15048 493 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 PCGF5Q86SE9 256 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 LRRC43Q8N309 656 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 EPAS1Q99814 870 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 WBP1LQ9NX94 342 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 OR12D3Q9UGF7 316 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 PLXNB2O15031 1838 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 A8MX80 341 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 RASA4BC9J798 803 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 RASA4O43374 803 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 MYOGP15173 224 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 KCNE1P15382 129 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 TPH1P17752 444 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 IGFBP4P22692 258 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 USP41Q3LFD5 358 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 ERMARDQ5T6L9 678 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 KIAA0319Q5VV43 1072 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 NXNQ6DKJ4 435 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 MAB21L3Q8N8X9 362 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 TTC13Q8NBP0 860 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 FBXO22Q8NEZ5 403 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 ELAC2Q9BQ52 826 aaKnown RBP9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 SMG9Q9H0W8 520 aaKnown RBP9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 SUDS3Q9H7L9 328 aaPredicted RBP9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 CNOT10Q9H9A5 744 aaKnown RBP9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 AVENQ9NQS1 362 aaPredicted RBP9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 DDX56Q9NY93 547 aaKnown RBP9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 ATG2BQ96BY7 2078 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 H3BRJ5 948 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 ADAM12O43184 909 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 AVILO75366 819 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 PCK1P35558 622 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 SLC29A2Q14542 456 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 PRPSAP1Q14558 356 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 PCBP1Q15365 356 aaKnown RBP eCLIP9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 MAPRE1Q15691 268 aaKnown RBP9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 BOLA3Q53S33 107 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 RNF19BQ6ZMZ0 732 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 TMEM86AQ8N2M4 240 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 DCLK2Q8N568 766 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 IPMKQ8NFU5 416 aa9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 DDX23Q9BUQ8 820 aaKnown RBP9.34□□□□□ -0.91
CCDC144B-201ENST00000285176 SEMA4AQ9H3S1 761 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms