RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 SOX13Q9UN79 622 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 DOCK5Q9H7D0 1870 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 LOC100653049A0A140TA62 436 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 HMX2A2RU54 273 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 SDR42E2A6NKP2 422 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 KRT34O76011 436 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 IL1BP01584 269 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 ITGA2BP08514 1039 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 SMIM18P0DKX4 95 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 YWHAZP63104 245 aaKnown RBP11.73□□□□□ -0.53
SCLT1-201ENST00000281142 TUBB3Q13509 450 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 GK3PQ14409 553 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 PDK3Q15120 406 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 MMEL1Q495T6 779 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 VWA5B1Q5TIE3 1220 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 TTC39BQ5VTQ0 682 aaPredicted RBP11.73□□□□□ -0.53
SCLT1-201ENST00000281142 CRLF3Q8IUI8 442 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 STKLD1Q8NE28 680 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 SPATA18Q8TC71 538 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 NTPCRQ9BSD7 190 aaKnown RBP11.73□□□□□ -0.53
SCLT1-201ENST00000281142 YIPF2Q9BWQ6 316 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 ARHGAP39Q9C0H5 1083 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 POLR3FQ9H1D9 316 aaPredicted RBP11.73□□□□□ -0.53
SCLT1-201ENST00000281142 DDX56Q9NY93 547 aaKnown RBP11.73□□□□□ -0.53
SCLT1-201ENST00000281142 LRRC37A2A6NM11 1700 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 ZNF236Q9UL36 1845 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 CAPN8A6NHC0 703 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 RAG1P15918 1043 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 CLDN10P78369 228 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 PIGHQ14442 188 aaPredicted RBP11.73□□□□□ -0.53
SCLT1-201ENST00000281142 KCTD2Q14681 263 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 GRAMD1BQ3KR37 738 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 PTPN20Q4JDL3 420 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 DENND1BQ6P3S1 775 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 KYAT3Q6YP21 454 aaKnown RBP11.73□□□□□ -0.53
SCLT1-201ENST00000281142 NDUFAF2Q8N183 169 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 TMEM143Q96AN5 459 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 LENG1Q96BZ8 264 aaPredicted RBP11.73□□□□□ -0.53
SCLT1-201ENST00000281142 FAF2Q96CS3 445 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 OLFM3Q96PB7 478 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 PHF12Q96QT6 1004 aa11.73□□□□□ -0.53
SCLT1-201ENST00000281142 DNAJC25-GNG10A0A024R161 153 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 TTLL13PA6NNM8 815 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 WDR64B1ANS9 1081 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 FKBP6O75344 327 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 TMCC1O94876 653 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 CALB1P05937 261 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 SERPINA6P08185 405 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 SERPINB6P35237 376 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 RPL10AP62906 217 aaKnown RBP11.72□□□□□ -0.53
SCLT1-201ENST00000281142 KCNJ11Q14654 390 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 SH3PXD2AQ5TCZ1 1133 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 OLFML2BQ68BL8 750 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 DARS2Q6PI48 645 aaKnown RBP11.72□□□□□ -0.53
SCLT1-201ENST00000281142 C1orf228Q6PIY5 440 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 UGT2A3Q6UWM9 527 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 MAVSQ7Z434 540 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 UNC5BQ8IZJ1 945 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 TARS2Q9BW92 718 aaKnown RBP11.72□□□□□ -0.53
SCLT1-201ENST00000281142 KLHL4Q9C0H6 718 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 RAB6BQ9NRW1 208 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 ANKEF1Q9NU02 776 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 DDX18Q9NVP1 670 aaKnown RBP11.72□□□□□ -0.53
SCLT1-201ENST00000281142 SEPT9Q9UHD8 586 aaPredicted RBP11.72□□□□□ -0.53
SCLT1-201ENST00000281142 DNAJC16Q9Y2G8 782 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 MCM3APO60318 1980 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 WDR81Q562E7 1941 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 SNNO75324 88 aaPredicted RBP11.72□□□□□ -0.53
SCLT1-201ENST00000281142 STBD1O95210 358 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 SNRPAP09012 282 aaKnown RBP11.72□□□□□ -0.53
SCLT1-201ENST00000281142 ADORA2AP29274 412 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 ZNF132P52740 706 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 PGM5Q15124 567 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 ATG16L1Q676U5 607 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 RBM44Q6ZP01 1051 aaKnown RBP11.72□□□□□ -0.53
SCLT1-201ENST00000281142 PLEKHH3Q7Z736 793 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 ADGRF2Q8IZF7 708 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 CCDC33Q8N5R6 958 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 KCTD6Q8NC69 237 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 RMDN3Q96TC7 470 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 SLX1AQ9BQ83 275 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 XAB2Q9HCS7 855 aaKnown RBP11.72□□□□□ -0.53
SCLT1-201ENST00000281142 PXMP2Q9NR77 195 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 ZDHHC7Q9NXF8 308 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 ARHGAP28Q9P2N2 729 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 BRCA2P51587 3418 aa11.72□□□□□ -0.53
SCLT1-201ENST00000281142 C15orf38-AP3S2A0A0A6YYH1 394 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 E2F8A0AVK6 867 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 SOWAHBA6NEL2 793 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 VILLO15195 856 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 BPGMP07738 259 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 KCNA4P22459 653 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 TNFSF9P41273 254 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 STX3Q13277 289 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 GRM2Q14416 872 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 GRB14Q14449 540 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 TLR1Q15399 786 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 MTERF2Q49AM1 385 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 SWSAP1Q6NVH7 229 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 ARPINQ7Z6K5 226 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms