RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 TRIM14Q14142 442 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 CDO1Q16878 200 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 ZC3H12AQ5D1E8 599 aaKnown RBP6.8□□□□□ -1.32
CD44-204ENST00000279452 FIGNQ5HY92 759 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 C10orf76Q5T2E6 689 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 E4F1Q66K89 784 aaPredicted RBP6.8□□□□□ -1.32
CD44-204ENST00000279452 GRAMD4Q6IC98 578 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 DNAJC24Q6P3W2 148 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 RHBDF2Q6PJF5 856 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 Q6ZS52 159 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 SLC26A9Q7LBE3 791 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 TMC6Q7Z403 805 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 CHSY1Q86X52 802 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 TMEM25Q86YD3 366 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 VSTM4Q8IW00 320 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 CCDC117Q8IWD4 279 aaPredicted RBP6.8□□□□□ -1.32
CD44-204ENST00000279452 DRC7Q8IY82 874 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 ADGRG2Q8IZP9 1017 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 ZNF276Q8N554 614 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 EMC1Q8N766 993 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 DTWD2Q8NBA8 298 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 PNKPQ96T60 521 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 PCDHB18PQ96TA0 734 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 DDX23Q9BUQ8 820 aaKnown RBP6.8□□□□□ -1.32
CD44-204ENST00000279452 EDEM3Q9BZQ6 932 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 TTYH3Q9C0H2 523 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 ARHGEF4Q9NR80 690 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 ASNSD1Q9NWL6 643 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.8□□□□□ -1.32
CD44-204ENST00000279452 STIM2Q9P246 746 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 WDR35Q9P2L0 1181 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 SLC12A6Q9UHW9 1150 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 TLR6Q9Y2C9 796 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 GOLGA6L7A0A1B0GV03 622 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 TBC1D3BA6NDS4 549 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 ATMINO43313 823 aaPredicted RBP6.79□□□□□ -1.32
CD44-204ENST00000279452 RNF40O75150 1001 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 KAT7O95251 611 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 KLKB1P03952 638 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 SERPING1P05155 500 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 FYNP06241 537 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 SLC2A3P11169 496 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 UNGP13051 313 aaPredicted RBP6.79□□□□□ -1.32
CD44-204ENST00000279452 DRD1P21728 446 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 MMP8P22894 467 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 SDC4P31431 198 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 CCR1P32246 355 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 NOS2P35228 1153 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 FLT3P36888 993 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 OPRD1P41143 372 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 MATKP42679 507 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 GABRB2P47870 512 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 SLC6A11P48066 632 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 DGKGP49619 791 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 MLLT6P55198 1093 aaPredicted RBP6.79□□□□□ -1.32
CD44-204ENST00000279452 CENPCQ03188 943 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 DEUP1Q05D60 604 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 PPP2R5DQ14738 602 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 PREPLQ4J6C6 727 aaPredicted RBP6.79□□□□□ -1.32
CD44-204ENST00000279452 DGKKQ5KSL6 1271 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 RAP1GAP2Q684P5 730 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 ACAD10Q6JQN1 1059 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 FSTL4Q6MZW2 842 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 PPP1R2P3Q6NXS1 205 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 RFWD3Q6PCD5 774 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 DCUN1D2Q6PH85 259 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 Q6ZNB5 142 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 NUDT18Q6ZVK8 323 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 ZNF571Q7Z3V5 609 aaPredicted RBP6.79□□□□□ -1.32
CD44-204ENST00000279452 IRF2BP2Q7Z5L9 587 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 C12orf40Q86WS4 652 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 DNAAF5Q86Y56 855 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 KIAA1958Q8N8K9 716 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 ATP6V0D2Q8N8Y2 350 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 ZNF653Q96CK0 615 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 FCRL2Q96LA5 508 aaPredicted RBP6.79□□□□□ -1.32
CD44-204ENST00000279452 CFAP57Q96MR6 1250 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 MCEEQ96PE7 176 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 SLC2A13Q96QE2 648 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 TBCBQ99426 244 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 DDX50Q9BQ39 737 aaKnown RBP6.79□□□□□ -1.32
CD44-204ENST00000279452 OSBPL6Q9BZF3 934 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 TAS2R14Q9NYV8 317 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 AIPL1Q9NZN9 384 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 DEC1Q9P2X7 70 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 MYO1AQ9UBC5 1043 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 RAPGEFL1Q9UHV5 662 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 CAPN11Q9UMQ6 739 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 PAXBP1Q9Y5B6 917 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 BZW2Q9Y6E2 419 aaKnown RBP6.79□□□□□ -1.32
CD44-204ENST00000279452 DOCK8Q8NF50 2099 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 HELZP42694 1942 aaKnown RBP6.79□□□□□ -1.32
CD44-204ENST00000279452 GREB1Q4ZG55 1949 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 DOCK6Q96HP0 2047 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 COL4A2P08572 1712 aa6.79□□□□□ -1.32
CD44-204ENST00000279452 MYH10P35580 1976 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 F5H5T6 163 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 H0Y858 1186 aa6.78□□□□□ -1.32
CD44-204ENST00000279452 HOXC11O43248 304 aaPredicted RBP6.78□□□□□ -1.32
CD44-204ENST00000279452 GALR2O43603 387 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms