RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 RCN2Q14257 317 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 EFTUD2Q15029 972 aaKnown RBP eCLIP9.29□□□□□ -0.926e-7■■■□□ 18.5
SEC16A-201ENST00000277537 UBAP2Q5T6F2 1119 aaKnown RBP9.29□□□□□ -0.92
SEC16A-201ENST00000277537 OSTM1Q86WC4 334 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 RASSF3Q86WH2 238 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 TMEM86AQ8N2M4 240 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 AGR3Q8TD06 166 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 TMEM174Q8WUU8 243 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 STAMBPL1Q96FJ0 436 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 FAM111AQ96PZ2 611 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 ZBED2Q9BTP6 218 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 FRMD8P1Q9BZ68 369 aaPredicted RBP9.29□□□□□ -0.92
SEC16A-201ENST00000277537 PRDM12Q9H4Q4 367 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 SP110Q9HB58 689 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 LRRC4CQ9HCJ2 640 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 OR12D3Q9UGF7 316 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 SFMBT1Q9UHJ3 866 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 G3BP2Q9UN86 482 aaKnown RBP9.29□□□□□ -0.92
SEC16A-201ENST00000277537 GIT1Q9Y2X7 761 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 KIAA1217Q5T5P2 1943 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 RBM47A0AV96 593 aaKnown RBP9.29□□□□□ -0.92
SEC16A-201ENST00000277537 YJEFN3A6XGL0 299 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 E7ENQ6 273 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 FAM189A1O60320 539 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 DNAJB2P25686 324 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 PBX3P40426 434 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 KBTBD12Q3ZCT8 623 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 SYPL2Q5VXT5 272 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 FUKQ8N0W3 1084 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 NDUFAF2Q8N183 169 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 SLC25A41Q8N5S1 370 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 FBXO32Q969P5 355 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 ATXN3LQ9H3M9 355 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 CNTN3Q9P232 1028 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 TLK1Q9UKI8 766 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 CNTN6Q9UQ52 1028 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 SNX10Q9Y5X0 201 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 DOCK5Q9H7D0 1870 aa9.29□□□□□ -0.92
SEC16A-201ENST00000277537 ARHGAP42A6NI28 874 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 EIF4E1BA6NMX2 242 aaKnown RBP9.28□□□□□ -0.92
SEC16A-201ENST00000277537 F9P00740 461 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 IRF1P10914 325 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 COG7P83436 770 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 ITPRIPL1Q6GPH6 555 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 SPATA21Q7Z572 469 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 ANKS1BQ7Z6G8 1248 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 OR6P1Q8NGX9 317 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 PCDH19Q8TAB3 1148 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 SLC35F5Q8WV83 523 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 CPT1BQ92523 772 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 PEBP4Q96S96 227 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 NPHS2Q9NP85 383 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 ETNK2Q9NVF9 386 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 CDH9Q9ULB4 789 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 FIS1Q9Y3D6 152 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 DOCK1Q14185 1865 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 C3orf70A6NLC5 250 aaPredicted RBP9.28□□□□□ -0.92
SEC16A-201ENST00000277537 GOLGA8TH3BQL2 631 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 ERCC2P18074 760 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 SLC25A11Q02978 314 aaKnown RBP9.28□□□□□ -0.92
SEC16A-201ENST00000277537 INCA1Q0VD86 236 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 TUSC3Q13454 348 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 HFE2Q6ZVN8 426 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 SLC26A9Q7LBE3 791 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 MICAL1Q8TDZ2 1067 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 PPP4R1Q8TF05 950 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 SH3TC2Q8TF17 1288 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 GIPC2Q8TF65 315 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 NKD2Q969F2 451 aaPredicted RBP9.28□□□□□ -0.92
SEC16A-201ENST00000277537 B3GALT6Q96L58 329 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 DEFB118Q96PH6 123 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 CSPG4P5Q96PW8 444 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 MYCBPQ99417 103 aaPredicted RBP9.28□□□□□ -0.92
SEC16A-201ENST00000277537 UBXN6Q9BZV1 441 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 RNF186Q9NXI6 227 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 DSEQ9UL01 958 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 MSI1O43347 362 aaKnown RBP9.28□□□□□ -0.92
SEC16A-201ENST00000277537 SLC10A3P09131 477 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 PYGBP11216 843 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 CYP3A5P20815 502 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 TKTP29401 623 aaKnown RBP9.28□□□□□ -0.92
SEC16A-201ENST00000277537 ACLYP53396 1101 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 HDAC4P56524 1084 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 SIX1Q15475 284 aaPredicted RBP9.28□□□□□ -0.92
SEC16A-201ENST00000277537 SLC25A52Q3SY17 297 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 FNBP1LQ5T0N5 605 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 CHSY1Q86X52 802 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 NUDCD3Q8IVD9 361 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 RYBPQ8N488 228 aaPredicted RBP9.28□□□□□ -0.92
SEC16A-201ENST00000277537 DCLK2Q8N568 766 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 ATAD1Q8NBU5 361 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 SMG8Q8ND04 991 aaKnown RBP9.28□□□□□ -0.92
SEC16A-201ENST00000277537 SCAMP5Q8TAC9 235 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 MCUR1Q96AQ8 359 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 RPRD1AQ96P16 312 aaPredicted RBP9.28□□□□□ -0.92
SEC16A-201ENST00000277537 TACO1Q9BSH4 297 aaKnown RBP9.28□□□□□ -0.92
SEC16A-201ENST00000277537 SENP1Q9P0U3 644 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 ATP11BQ9Y2G3 1177 aa9.28□□□□□ -0.92
SEC16A-201ENST00000277537 TCRBV7S3A2A0A539 114 aa9.27□□□□□ -0.92
SEC16A-201ENST00000277537 WDR27A2RRH5 827 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms