RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 TUBGCP2Q9BSJ2 902 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 DCLK3Q9C098 648 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 NDST4Q9H3R1 872 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 CD248Q9HCU0 757 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 ABCC13Q9NSE7 274 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 OLA1Q9NTK5 396 aaKnown RBP15.08■□□□□ 0
HMGN3-201ENST00000275036 WDR35Q9P2L0 1181 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 DACH1Q9UI36 760 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 FBXO10Q9UK96 956 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 STRIP2Q9ULQ0 834 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 ZNF510Q9Y2H8 683 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.07■□□□□ 0
HMGN3-201ENST00000275036 DCDC2BA2VCK2 349 aa15.07■□□□□ 0
HMGN3-201ENST00000275036 THAP12O43422 761 aa15.07■□□□□ 0
HMGN3-201ENST00000275036 PENKP01210 267 aaPredicted RBP15.07■□□□□ 0
HMGN3-201ENST00000275036 FYNP06241 537 aa15.07■□□□□ 0
HMGN3-201ENST00000275036 PNMA6AP0CW24 399 aaPredicted RBP15.07■□□□□ 0
HMGN3-201ENST00000275036 PRKCSHP14314 528 aaPredicted RBP15.07■□□□□ 0
HMGN3-201ENST00000275036 WASP42768 502 aa15.07■□□□□ 0
HMGN3-201ENST00000275036 FOXK2Q01167 660 aa15.07■□□□□ 0
HMGN3-201ENST00000275036 KCNMA1Q12791 1236 aa15.07■□□□□ 0
HMGN3-201ENST00000275036 VWA3BQ502W6 1294 aa15.07■□□□□ 0
HMGN3-201ENST00000275036 TCEAL6Q6IPX3 200 aa15.07■□□□□ 0
HMGN3-201ENST00000275036 MSANTD2Q6P1R3 559 aa15.07■□□□□ 0
HMGN3-201ENST00000275036 FAM114A1Q8IWE2 563 aa15.07■□□□□ 0
HMGN3-201ENST00000275036 FAM217AQ8IXS0 508 aa15.07■□□□□ 0
HMGN3-201ENST00000275036 ZNF513Q8N8E2 541 aaPredicted RBP15.07■□□□□ 0
HMGN3-201ENST00000275036 RNF139Q8WU17 664 aa15.07■□□□□ 0
HMGN3-201ENST00000275036 RLN3Q8WXF3 142 aa15.07■□□□□ 0
HMGN3-201ENST00000275036 TCEAL3Q969E4 200 aa15.07■□□□□ 0
HMGN3-201ENST00000275036 PLD4Q96BZ4 506 aa15.07■□□□□ 0
HMGN3-201ENST00000275036 ERLEC1Q96DZ1 483 aa15.07■□□□□ 0
HMGN3-201ENST00000275036 XPO6Q96QU8 1125 aaKnown RBP15.07■□□□□ 0
HMGN3-201ENST00000275036 MIS12Q9H081 205 aa15.07■□□□□ 0
HMGN3-201ENST00000275036 TJP2Q9UDY2 1190 aa15.07■□□□□ 0
HMGN3-201ENST00000275036 CDV3Q9UKY7 258 aaKnown RBP15.07■□□□□ 0
HMGN3-201ENST00000275036 CLEC4EQ9ULY5 219 aa15.07■□□□□ 0
HMGN3-201ENST00000275036 TNRC6BQ9UPQ9 1833 aaKnown RBP15.06■□□□□ 0
HMGN3-201ENST00000275036 A0A1W2PQF6 199 aa15.06■□□□□ 0
HMGN3-201ENST00000275036 TCRBV21S2A2A0A5A6 115 aa15.06■□□□□ 0
HMGN3-201ENST00000275036 KCNJ18B7U540 433 aa15.06■□□□□ 0
HMGN3-201ENST00000275036 FBXO21O94952 628 aa15.06■□□□□ 0
HMGN3-201ENST00000275036 LTFP02788 710 aa15.06■□□□□ 0
HMGN3-201ENST00000275036 CHKAP35790 457 aa15.06■□□□□ 0
HMGN3-201ENST00000275036 MPLP40238 635 aa15.06■□□□□ 0
HMGN3-201ENST00000275036 USP8P40818 1118 aa15.06■□□□□ 0
HMGN3-201ENST00000275036 KCNJ12Q14500 433 aa15.06■□□□□ 0
HMGN3-201ENST00000275036 MEA1Q16626 185 aa15.06■□□□□ 0
HMGN3-201ENST00000275036 HSF5Q4G112 596 aaPredicted RBP15.06■□□□□ 0
HMGN3-201ENST00000275036 CT47A1Q5JQC4 288 aaPredicted RBP15.06■□□□□ 0
HMGN3-201ENST00000275036 EOGTQ5NDL2 527 aa15.06■□□□□ 0
HMGN3-201ENST00000275036 PMS2CLQ68D20 193 aa15.06■□□□□ 0
HMGN3-201ENST00000275036 SCUBE3Q8IX30 993 aa15.06■□□□□ 0
HMGN3-201ENST00000275036 WDTC1Q8N5D0 677 aa15.06■□□□□ 0
HMGN3-201ENST00000275036 FAM81BQ96LP2 452 aa15.06■□□□□ 0
HMGN3-201ENST00000275036 SLC4A5Q9BY07 1137 aa15.06■□□□□ 0
HMGN3-201ENST00000275036 ST7Q9NRC1 585 aa15.06■□□□□ 0
HMGN3-201ENST00000275036 MBD1Q9UIS9 605 aaPredicted RBP15.06■□□□□ 0
HMGN3-201ENST00000275036 DNAJC12Q9UKB3 198 aa15.06■□□□□ 0
HMGN3-201ENST00000275036 STARD13Q9Y3M8 1113 aa15.06■□□□□ 0
HMGN3-201ENST00000275036 HBS1LQ9Y450 684 aaKnown RBP15.06■□□□□ 0
HMGN3-201ENST00000275036 NFE2L3Q9Y4A8 694 aa15.06■□□□□ 0
HMGN3-201ENST00000275036 CKAP5Q14008 2032 aa15.05■□□□□ 0
HMGN3-201ENST00000275036 PI4KAP42356 2102 aa15.05■□□□□ 0
HMGN3-201ENST00000275036 SPTBN2O15020 2390 aa15.05■□□□□ 0
HMGN3-201ENST00000275036 E5RJQ4 531 aa15.05■□□□□ -0
HMGN3-201ENST00000275036 FOXN3O00409 490 aaPredicted RBP15.05■□□□□ -0
HMGN3-201ENST00000275036 GFRA2O00451 464 aa15.05■□□□□ -0
HMGN3-201ENST00000275036 SLC30A4O14863 429 aa15.05■□□□□ -0
HMGN3-201ENST00000275036 PAPSS1O43252 624 aaPredicted RBP15.05■□□□□ -0
HMGN3-201ENST00000275036 MED7O43513 233 aa15.05■□□□□ -0
HMGN3-201ENST00000275036 IGLV3-27P01718 113 aa15.05■□□□□ -0
HMGN3-201ENST00000275036 ZNF806P0C7X5 589 aa15.05■□□□□ -0
HMGN3-201ENST00000275036 GBP1P32455 592 aa15.05■□□□□ -0
HMGN3-201ENST00000275036 CLCN1P35523 988 aa15.05■□□□□ -0
HMGN3-201ENST00000275036 P2RY2P41231 377 aa15.05■□□□□ -0
HMGN3-201ENST00000275036 DGKGP49619 791 aa15.05■□□□□ -0
HMGN3-201ENST00000275036 MAP7D1Q3KQU3 841 aa15.05■□□□□ -0
HMGN3-201ENST00000275036 TCP11X2Q5H9J9 407 aa15.05■□□□□ -0
HMGN3-201ENST00000275036 KIAA1211LQ6NV74 962 aa15.05■□□□□ -0
HMGN3-201ENST00000275036 C11orf57Q6ZUT1 292 aaPredicted RBP15.05■□□□□ -0
HMGN3-201ENST00000275036 CPXM2Q8N436 756 aa15.05■□□□□ -0
HMGN3-201ENST00000275036 ENOX1Q8TC92 643 aaKnown RBP15.05■□□□□ -0
HMGN3-201ENST00000275036 NETO1Q8TDF5 533 aa15.05■□□□□ -0
HMGN3-201ENST00000275036 STK32AQ8WU08 396 aa15.05■□□□□ -0
HMGN3-201ENST00000275036 HMGB4Q8WW32 186 aa15.05■□□□□ -0
HMGN3-201ENST00000275036 PIWIL1Q96J94 861 aaKnown RBP15.05■□□□□ -0
HMGN3-201ENST00000275036 RTKNQ9BST9 563 aa15.05■□□□□ -0
HMGN3-201ENST00000275036 BCLAF3A2AJT9 711 aaKnown RBP15.04■□□□□ -0
HMGN3-201ENST00000275036 GABRG2P18507 467 aa15.04■□□□□ -0
HMGN3-201ENST00000275036 HARS2P49590 506 aaKnown RBP15.04■□□□□ -0
HMGN3-201ENST00000275036 PDCLQ13371 301 aa15.04■□□□□ -0
HMGN3-201ENST00000275036 GEN1Q17RS7 908 aa15.04■□□□□ -0
HMGN3-201ENST00000275036 PREPLQ4J6C6 727 aaPredicted RBP15.04■□□□□ -0
HMGN3-201ENST00000275036 USP39Q53GS9 565 aaKnown RBP15.04■□□□□ -0
HMGN3-201ENST00000275036 CDKAL1Q5VV42 579 aa15.04■□□□□ -0
HMGN3-201ENST00000275036 TMEM110Q86TL2 294 aa15.04■□□□□ -0
HMGN3-201ENST00000275036 SLC47A2Q86VL8 602 aa15.04■□□□□ -0
HMGN3-201ENST00000275036 PASD1Q8IV76 773 aa15.04■□□□□ -0
HMGN3-201ENST00000275036 KCNV2Q8TDN2 545 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms