RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 ZNRF3Q9ULT6 936 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 ZMYM2Q9UBW7 1377 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 H3BMM5 538 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 SKAP2O75563 359 aaPredicted RBP8.18□□□□□ -1.1
LIMD1-201ENST00000273317 NR3C2P08235 984 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 GYS1P13807 737 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 SLC1A6P48664 564 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 ZNF618Q5T7W0 954 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 CELF1Q92879 486 aaKnown RBP8.18□□□□□ -1.1
LIMD1-201ENST00000273317 ZCCHC2Q9C0B9 1178 aaKnown RBP8.18□□□□□ -1.1
LIMD1-201ENST00000273317 SLITRK2Q9H156 845 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 CDC42EP4Q9H3Q1 356 aaKnown RBP8.18□□□□□ -1.1
LIMD1-201ENST00000273317 WDCPQ9H6R7 721 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 NMRK2Q9NPI5 230 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 SH3BP4Q9P0V3 963 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 ITGA11Q9UKX5 1188 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 PIK3C2BO00750 1634 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 PIPSLA2A3N6 862 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 MIEF2Q96C03 454 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 LOC100653049A0A140TA62 436 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 ATP9AO75110 1047 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 MTRF1O75570 445 aaKnown RBP8.18□□□□□ -1.1
LIMD1-201ENST00000273317 GSTM1P09488 218 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 CDH24Q86UP0 819 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 ATG16L2Q8NAA4 619 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 WDR36Q8NI36 951 aaKnown RBP8.18□□□□□ -1.1
LIMD1-201ENST00000273317 VCPIP1Q96JH7 1222 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 RSL24D1Q9UHA3 163 aaKnown RBP8.18□□□□□ -1.1
LIMD1-201ENST00000273317 SNPHO15079 494 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 SKP1P63208 163 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 TBCELQ5QJ74 424 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 MZT2BQ6NZ67 158 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 SPOCD1Q6ZMY3 1216 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 ZDHHC17Q8IUH5 632 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 REXO1L1PQ8IX06 675 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 ZCCHC7Q8N3Z6 543 aaKnown RBP8.18□□□□□ -1.1
LIMD1-201ENST00000273317 DDIT4Q9NX09 232 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 PLA2G6O60733 806 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 RPN2P04844 631 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 CYP2C9P11712 490 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 PABPC1P11940 636 aaKnown RBP8.18□□□□□ -1.1
LIMD1-201ENST00000273317 RAG1P15918 1043 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 CYP11B2P19099 503 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 WARSP23381 471 aaKnown RBP8.18□□□□□ -1.1
LIMD1-201ENST00000273317 CYP24A1Q07973 514 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 TMEM132BQ14DG7 1078 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 C2CD6Q53TS8 623 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 KCNH7Q9NS40 1196 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 MROH2AA6NES4 1674 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 FUT11Q495W5 492 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 ZC2HC1CQ53FD0 456 aaPredicted RBP8.18□□□□□ -1.1
LIMD1-201ENST00000273317 AADATQ8N5Z0 425 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 GPRC5AQ8NFJ5 357 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 RAET1EQ8TD07 263 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 KCTD10Q9H3F6 313 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 KCNK4Q9NYG8 393 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 PRR12Q9ULL5 1215 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 STK25O00506 426 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 FSBPO95073 299 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 DCTN2Q13561 401 aaKnown RBP8.18□□□□□ -1.1
LIMD1-201ENST00000273317 AGKQ53H12 422 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 ATAD3BQ5T9A4 648 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 EPHX4Q8IUS5 362 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 SLC25A23Q9BV35 468 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 WDR41Q9HAD4 459 aa8.18□□□□□ -1.1
LIMD1-201ENST00000273317 ARHGEF28Q8N1W1 1705 aaKnown RBP8.17□□□□□ -1.1
LIMD1-201ENST00000273317 MYL12BO14950 172 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 PROSCO94903 275 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 SKIV2L2P42285 1042 aaKnown RBP8.17□□□□□ -1.1
LIMD1-201ENST00000273317 LRRC49Q8IUZ0 686 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 CDK20Q8IZL9 346 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 ZNF483Q8TF39 744 aaPredicted RBP8.17□□□□□ -1.1
LIMD1-201ENST00000273317 POLD4Q9HCU8 107 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 FAM205CA6NFA0 338 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 AP1G2O75843 785 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 SUPT7LO94864 414 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 UBOX5O94941 541 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 CNPP09543 421 aaKnown RBP8.17□□□□□ -1.1
LIMD1-201ENST00000273317 UQCRBP14927 111 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 DNAJB2P25686 324 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 GPC1P35052 558 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 OVGP1Q12889 678 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 Q4G0T1 1027 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 ADGRF2Q8IZF7 708 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 TMEM237Q96Q45 408 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 C8orf4Q9NR00 106 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 OGTO15294 1046 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 RPS12P25398 132 aaKnown RBP8.17□□□□□ -1.1
LIMD1-201ENST00000273317 EPHB2P29323 1055 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 KCNJ1P48048 391 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 CSE1LP55060 971 aaKnown RBP8.17□□□□□ -1.1
LIMD1-201ENST00000273317 PWP1Q13610 501 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 MZT2AQ6P582 158 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 ENGASEQ8NFI3 743 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 NRDE2Q9H7Z3 1164 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 AP4E1Q9UPM8 1137 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 CD163L1Q9NR16 1453 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 EFCAB12Q6NXP0 572 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 SPIRE2Q8WWL2 714 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 MRPL39Q9NYK5 338 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms