RNA–Protein interactions for RNA: ENST00000272433.6

SFXN5-201, Transcript of sideroflexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN5, Length 4,140 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-201ENST00000272433 HTR3CQ8WXA8 447 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 ASIC4Q96FT7 647 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 STRA6Q9BX79 667 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 GPR88Q9GZN0 384 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 FGFR1OP2Q9NVK5 253 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 MARCH2Q9P0N8 246 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 COL4A5P29400 1685 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 RIPK2O43353 540 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 AVILO75366 819 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 RPL9P32969 192 aaKnown RBP11.46□□□□□ -0.57
SFXN5-201ENST00000272433 ERFP50548 548 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 GHRHRQ02643 423 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 TLE2Q04725 743 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 ELAVL2Q12926 359 aaKnown RBP11.46□□□□□ -0.57
SFXN5-201ENST00000272433 POU6F1Q14863 301 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 SCAMP5Q8TAC9 235 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 CAVIN3Q969G5 261 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 SGF29Q96ES7 293 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 NEUROG2Q9H2A3 272 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 LSM7Q9UK45 103 aaKnown RBP11.46□□□□□ -0.57
SFXN5-201ENST00000272433 SNX10Q9Y5X0 201 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 CDY1Q9Y6F8 540 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 STYXL1Q9Y6J8 313 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 MYH15Q9Y2K3 1946 aa11.46□□□□□ -0.57
SFXN5-201ENST00000272433 F5H5T6 163 aa11.46□□□□□ -0.58
SFXN5-201ENST00000272433 PFDN6O15212 129 aa11.46□□□□□ -0.58
SFXN5-201ENST00000272433 MATKP42679 507 aa11.46□□□□□ -0.58
SFXN5-201ENST00000272433 DNAJC3Q13217 504 aa11.46□□□□□ -0.58
SFXN5-201ENST00000272433 MORF4L2Q15014 288 aa11.46□□□□□ -0.58
SFXN5-201ENST00000272433 FASTKD1Q53R41 847 aaKnown RBP11.46□□□□□ -0.58
SFXN5-201ENST00000272433 USP6NLQ92738 828 aa11.46□□□□□ -0.58
SFXN5-201ENST00000272433 PTPRN2Q92932 1015 aa11.46□□□□□ -0.58
SFXN5-201ENST00000272433 KLHL29Q96CT2 875 aa11.46□□□□□ -0.58
SFXN5-201ENST00000272433 MPP6Q9NZW5 540 aa11.46□□□□□ -0.58
SFXN5-201ENST00000272433 MYH9P35579 1960 aaKnown RBP11.46□□□□□ -0.58
SFXN5-201ENST00000272433 ACRP10323 421 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 ERCC2P18074 760 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 TGM2P21980 687 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 SLC11A2P49281 568 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 CDH18Q13634 790 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 DPYSL3Q14195 570 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 SCARA3Q6AZY7 606 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 TOP6BLQ8N6T0 577 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 DDI1Q8WTU0 396 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 ZNF296Q8WUU4 475 aaPredicted RBP11.45□□□□□ -0.58
SFXN5-201ENST00000272433 NRDE2Q9H7Z3 1164 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 TLR8Q9NR97 1041 aaKnown RBP11.45□□□□□ -0.58
SFXN5-201ENST00000272433 TLL2Q9Y6L7 1015 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 LY75O60449 1722 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 HSPA4LO95757 839 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 POLBP06746 335 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 OR1E1P30953 314 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 ASPHQ12797 758 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 CARNMT1Q8N4J0 409 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 SLAIN1Q8ND83 568 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 XPO6Q96QU8 1125 aaKnown RBP11.45□□□□□ -0.58
SFXN5-201ENST00000272433 PAAF1Q9BRP4 392 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.45□□□□□ -0.582e-6■■■■■ 29.7
SFXN5-201ENST00000272433 XYLT2Q9H1B5 865 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 MTIF3Q9H2K0 278 aaKnown RBP11.45□□□□□ -0.58
SFXN5-201ENST00000272433 FBXO44Q9H4M3 255 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 PFDN4Q9NQP4 134 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 NINJ2Q9NZG7 142 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 PPARGC1AQ9UBK2 798 aaKnown RBP11.45□□□□□ -0.58
SFXN5-201ENST00000272433 SLC39A10Q9ULF5 831 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 POLR2AP24928 1970 aaKnown RBP11.45□□□□□ -0.58
SFXN5-201ENST00000272433 ADAMTSL1Q8N6G6 1762 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.45□□□□□ -0.58
SFXN5-201ENST00000272433 IGKV6-21A0A0C4DH24 114 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.45□□□□□ -0.58
SFXN5-201ENST00000272433 YJEFN3A6XGL0 299 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 E7ENQ6 273 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 CLGNO14967 610 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 SLC2A3P11169 496 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 KLRC2P26717 231 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 NR1H3Q13133 447 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 ZNF177Q13360 481 aaPredicted RBP11.45□□□□□ -0.58
SFXN5-201ENST00000272433 USP10Q14694 798 aaKnown RBP11.45□□□□□ -0.58
SFXN5-201ENST00000272433 SKIV2LQ15477 1246 aaKnown RBP11.45□□□□□ -0.58
SFXN5-201ENST00000272433 DCAF12L1Q5VU92 463 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 RAP1GAP2Q684P5 730 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 DUPD1Q68J44 220 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 C16orf59Q7L2K0 433 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 TBC1D1Q86TI0 1168 aaPredicted RBP11.45□□□□□ -0.58
SFXN5-201ENST00000272433 TADA2BQ86TJ2 420 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 HOMEZQ8IX15 550 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 MRPS31Q92665 395 aaKnown RBP11.45□□□□□ -0.58
SFXN5-201ENST00000272433 TMBIM4Q9HC24 238 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 PCDHB12Q9Y5F1 795 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 SF3B1O75533 1304 aaKnown RBP eCLIP11.45□□□□□ -0.584e-6■■■■■ 130.1
SFXN5-201ENST00000272433 FAM47DPA6NHR8 397 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 HOXA11P31270 313 aaPredicted RBP11.45□□□□□ -0.58
SFXN5-201ENST00000272433 SCNN1BP51168 640 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 SOX4Q06945 474 aaPredicted RBP11.45□□□□□ -0.58
SFXN5-201ENST00000272433 ANO4Q32M45 955 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 LVRNQ6Q4G3 990 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 BBS12Q6ZW61 710 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 STMN2Q93045 179 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 LRRC19Q9H756 370 aa11.45□□□□□ -0.58
SFXN5-201ENST00000272433 ETNK1Q9HBU6 452 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms