RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 PEX2P28328 305 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 AQP4P55087 323 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 TBCCQ15814 346 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 CCDC14Q49A88 953 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 ATF7IP2Q5U623 682 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 MPZL3Q6UWV2 235 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 MAP7D3Q8IWC1 876 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 C12orf29Q8N999 325 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 IL1RAPL1Q9NZN1 696 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 BRWD3Q6RI45 1802 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 CDK7P50613 346 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 RPS6KA3P51812 740 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 GBE1Q04446 702 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 CCNIQ14094 377 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 LIN52Q52LA3 116 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 RABGAP1LQ5R372 815 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 PDSS2Q86YH6 399 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 NIM1KQ8IY84 436 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 RTP4Q96DX8 246 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 GORASP1Q9BQQ3 440 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 B4GALT4O60513 344 aa28.38■■■□□ 2.13
CBX4-201ENST00000269397 FGF3P11487 239 aaPredicted RBP28.38■■■□□ 2.13
CBX4-201ENST00000269397 ISLR2Q6UXK2 745 aa28.38■■■□□ 2.13
CBX4-201ENST00000269397 JDP2Q8WYK2 163 aa28.38■■■□□ 2.13
CBX4-201ENST00000269397 DNAJB4Q9UDY4 337 aa28.38■■■□□ 2.13
CBX4-201ENST00000269397 WDR27A2RRH5 827 aa28.38■■■□□ 2.13
CBX4-201ENST00000269397 COPAP53621 1224 aa28.38■■■□□ 2.13
CBX4-201ENST00000269397 MSLNQ13421 630 aaPredicted RBP28.38■■■□□ 2.13
CBX4-201ENST00000269397 NETO2Q8NC67 525 aa28.38■■■□□ 2.13
CBX4-201ENST00000269397 ZNF280CQ8ND82 737 aa28.38■■■□□ 2.13
CBX4-201ENST00000269397 SNRNP25Q9BV90 132 aaKnown RBP28.38■■■□□ 2.13
CBX4-201ENST00000269397 BTBD7Q9P203 1132 aa28.38■■■□□ 2.13
CBX4-201ENST00000269397 PARP14Q460N5 1801 aa28.38■■■□□ 2.13
CBX4-201ENST00000269397 TPP1O14773 563 aa28.37■■■□□ 2.13
CBX4-201ENST00000269397 ALDOAP04075 364 aaKnown RBP28.37■■■□□ 2.13
CBX4-201ENST00000269397 ARRB2P32121 409 aa28.37■■■□□ 2.13
CBX4-201ENST00000269397 DLG1Q12959 904 aa28.37■■■□□ 2.13
CBX4-201ENST00000269397 ARCQ7LC44 396 aa28.37■■■□□ 2.13
CBX4-201ENST00000269397 AZIN2Q96A70 460 aa28.37■■■□□ 2.13
CBX4-201ENST00000269397 FRMD8Q9BZ67 464 aaPredicted RBP28.37■■■□□ 2.13
CBX4-201ENST00000269397 STK10O94804 968 aaKnown RBP28.37■■■□□ 2.13
CBX4-201ENST00000269397 TFE3P19532 575 aaPredicted RBP28.37■■■□□ 2.13
CBX4-201ENST00000269397 NCF2P19878 526 aaPredicted RBP28.37■■■□□ 2.13
CBX4-201ENST00000269397 SLC10A2Q12908 348 aaPredicted RBP28.37■■■□□ 2.13
CBX4-201ENST00000269397 HPS6Q86YV9 775 aa28.37■■■□□ 2.13
CBX4-201ENST00000269397 RPF1Q9H9Y2 349 aaKnown RBP28.37■■■□□ 2.13
CBX4-201ENST00000269397 PACSIN3Q9UKS6 424 aa28.37■■■□□ 2.13
CBX4-201ENST00000269397 PCDHA11Q9Y5I1 949 aa28.37■■■□□ 2.13
CBX4-201ENST00000269397 BCLAF3A2AJT9 711 aaKnown RBP28.36■■■□□ 2.13
CBX4-201ENST00000269397 SERPINB6P35237 376 aa28.36■■■□□ 2.13
CBX4-201ENST00000269397 PPM1JQ5JR12 505 aa28.36■■■□□ 2.13
CBX4-201ENST00000269397 BSPRYQ5W0U4 402 aa28.36■■■□□ 2.13
CBX4-201ENST00000269397 JADE1Q6IE81 842 aa28.36■■■□□ 2.13
CBX4-201ENST00000269397 RAB3IL1Q8TBN0 382 aa28.36■■■□□ 2.13
CBX4-201ENST00000269397 GDPD5Q8WTR4 605 aa28.36■■■□□ 2.13
CBX4-201ENST00000269397 PPP1R16BQ96T49 567 aa28.36■■■□□ 2.13
CBX4-201ENST00000269397 MINDY3Q9H8M7 445 aa28.36■■■□□ 2.13
CBX4-201ENST00000269397 TXNDC9O14530 226 aa28.36■■■□□ 2.13
CBX4-201ENST00000269397 MAGEA3P43357 314 aa28.36■■■□□ 2.13
CBX4-201ENST00000269397 CUL3Q13618 768 aa28.36■■■□□ 2.13
CBX4-201ENST00000269397 PDE1CQ14123 709 aaPredicted RBP28.36■■■□□ 2.13
CBX4-201ENST00000269397 LY6KQ17RY6 165 aa28.36■■■□□ 2.13
CBX4-201ENST00000269397 C10orf107Q8IVU9 208 aa28.36■■■□□ 2.13
CBX4-201ENST00000269397 RTKN2Q8IZC4 609 aa28.36■■■□□ 2.13
CBX4-201ENST00000269397 STK32BQ9NY57 414 aa28.36■■■□□ 2.13
CBX4-201ENST00000269397 LACTBL1A8MY62 500 aa28.36■■■□□ 2.13
CBX4-201ENST00000269397 TGM2P21980 687 aa28.36■■■□□ 2.13
CBX4-201ENST00000269397 GRIA2P42262 883 aa28.36■■■□□ 2.13
CBX4-201ENST00000269397 ATXN1P54253 815 aaKnown RBP28.36■■■□□ 2.13
CBX4-201ENST00000269397 DEFB107AQ8IZN7 70 aa28.36■■■□□ 2.13
CBX4-201ENST00000269397 TSPAN16Q9UKR8 245 aa28.36■■■□□ 2.13
CBX4-201ENST00000269397 PSAT1Q9Y617 370 aa28.36■■■□□ 2.13
CBX4-201ENST00000269397 RLFQ13129 1914 aa28.35■■■□□ 2.13
CBX4-201ENST00000269397 IDH3AP50213 366 aa28.35■■■□□ 2.13
CBX4-201ENST00000269397 CDK18Q07002 472 aa28.35■■■□□ 2.13
CBX4-201ENST00000269397 MED21Q13503 144 aa28.35■■■□□ 2.13
CBX4-201ENST00000269397 IER5Q5VY09 327 aa28.35■■■□□ 2.13
CBX4-201ENST00000269397 ACAD11Q709F0 780 aa28.35■■■□□ 2.13
CBX4-201ENST00000269397 CDT1Q9H211 546 aa28.35■■■□□ 2.13
CBX4-201ENST00000269397 CDH22Q9UJ99 828 aa28.35■■■□□ 2.13
CBX4-201ENST00000269397 F7P08709 466 aaPredicted RBP28.35■■■□□ 2.13
CBX4-201ENST00000269397 NDST1P52848 882 aa28.35■■■□□ 2.13
CBX4-201ENST00000269397 OAZ1P54368 228 aa28.35■■■□□ 2.13
CBX4-201ENST00000269397 TRIP10Q15642 601 aa28.35■■■□□ 2.13
CBX4-201ENST00000269397 SLC9A4Q6AI14 798 aa28.35■■■□□ 2.13
CBX4-201ENST00000269397 SCUBE3Q8IX30 993 aa28.35■■■□□ 2.13
CBX4-201ENST00000269397 PHTF2Q8N3S3 785 aa28.35■■■□□ 2.13
CBX4-201ENST00000269397 LRRC39Q96DD0 335 aa28.35■■■□□ 2.13
CBX4-201ENST00000269397 PGLYRP2Q96PD5 576 aa28.35■■■□□ 2.13
CBX4-201ENST00000269397 WRNIP1Q96S55 665 aa28.35■■■□□ 2.13
CBX4-201ENST00000269397 PTPRHQ9HD43 1115 aa28.35■■■□□ 2.13
CBX4-201ENST00000269397 ADAMTS5Q9UNA0 930 aa28.35■■■□□ 2.13
CBX4-201ENST00000269397 PTPRAP18433 802 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 ICAM3P32942 547 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 PCLAFQ15004 111 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 PDK2Q15119 407 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 AAGABQ6PD74 315 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 ILDR2Q71H61 639 aa28.34■■■□□ 2.13
CBX4-201ENST00000269397 MARK2Q7KZI7 788 aaKnown RBP28.34■■■□□ 2.13
CBX4-201ENST00000269397 SAMD7Q7Z3H4 446 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms