RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 TIGD5Q53EQ6 642 aa13.11□□□□□ -0.31
PRPF6-201ENST00000266079 ARHGAP18Q8N392 663 aa13.11□□□□□ -0.31
PRPF6-201ENST00000266079 PPFIBP2Q8ND30 876 aa13.11□□□□□ -0.31
PRPF6-201ENST00000266079 MAML1Q92585 1016 aa13.11□□□□□ -0.31
PRPF6-201ENST00000266079 ZNF560Q96MR9 790 aa13.11□□□□□ -0.31
PRPF6-201ENST00000266079 CHCHD3Q9NX63 227 aaKnown RBP13.11□□□□□ -0.31
PRPF6-201ENST00000266079 NME7Q9Y5B8 376 aa13.11□□□□□ -0.31
PRPF6-201ENST00000266079 KRT36O76013 467 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 TMED2Q15363 201 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 ENOSF1Q7L5Y1 443 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 TMEM173Q86WV6 379 aaPredicted RBP13.1□□□□□ -0.31
PRPF6-201ENST00000266079 LRRC52Q8N7C0 313 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 APPL2Q8NEU8 664 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 C1orf54Q8WWF1 131 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 CPA5Q8WXQ8 436 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 CASD1Q96PB1 797 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 NOCTQ9UK39 431 aaKnown RBP13.1□□□□□ -0.31
PRPF6-201ENST00000266079 PIK3R2O00459 728 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 ATMINO43313 823 aaPredicted RBP13.1□□□□□ -0.31
PRPF6-201ENST00000266079 CREB3O43889 395 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 SPAG7O75391 227 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 PYGBP11216 843 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 AP1B1Q10567 949 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 PDK4Q16654 411 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 SV2CQ496J9 727 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 ACSBG2Q5FVE4 666 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 LLGL2Q6P1M3 1020 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 NLRP9Q7RTR0 991 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 RIBC1Q8N443 379 aaPredicted RBP13.1□□□□□ -0.31
PRPF6-201ENST00000266079 BCO2Q9BYV7 579 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 NRDE2Q9H7Z3 1164 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 UBN1Q9NPG3 1134 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 C2CD2LO14523 706 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 CAPN9O14815 690 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 MTA2O94776 668 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 PSMG1O95456 288 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 LRPAP1P30533 357 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 FMO1Q01740 532 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 PTK6Q13882 451 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 GSTA3Q16772 222 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 SGO2Q562F6 1265 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 SYDE1Q6ZW31 735 aaPredicted RBP13.1□□□□□ -0.31
PRPF6-201ENST00000266079 ADGRF2Q8IZF7 708 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 NDNQ99608 321 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 VCX3BQ9H321 246 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 VCX3AQ9NNX9 186 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 ANAPC5Q9UJX4 755 aa13.1□□□□□ -0.31
PRPF6-201ENST00000266079 FSCN2O14926 492 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 SPOPO43791 374 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 CCDC22O60826 627 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 TBX10O75333 385 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 CILPO75339 1184 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 CYP3A5P20815 502 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 WDR5P61964 334 aaKnown RBP13.09□□□□□ -0.31
PRPF6-201ENST00000266079 KPNB1Q14974 876 aaKnown RBP13.09□□□□□ -0.31
PRPF6-201ENST00000266079 CTC1Q2NKJ3 1217 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 TRABD2AQ86V40 505 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 OSTM1Q86WC4 334 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 NPAS4Q8IUM7 802 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 ZNF606Q8WXB4 792 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 NCSTNQ92542 709 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 PWWP2AQ96N64 755 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 CYLDQ9NQC7 956 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 METTL5Q9NRN9 209 aaKnown RBP13.09□□□□□ -0.31
PRPF6-201ENST00000266079 PRPF4O43172 522 aaKnown RBP eCLIP13.09□□□□□ -0.312e-6■■□□□ 11.5
PRPF6-201ENST00000266079 ZWINTO95229 277 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 GNL1P36915 607 aaPredicted RBP13.09□□□□□ -0.31
PRPF6-201ENST00000266079 RABGGTBP53611 331 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 SLC18A1P54219 525 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 FPGSQ05932 587 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 NR1H3Q13133 447 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 CLNKQ7Z7G1 428 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 CPNE8Q86YQ8 564 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 SLC4A11Q8NBS3 891 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 UBA3Q8TBC4 463 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 KBTBD7Q8WVZ9 684 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 NR1H4Q96RI1 486 aaPredicted RBP13.09□□□□□ -0.31
PRPF6-201ENST00000266079 BTBD10Q9BSF8 475 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 SNX25Q9H3E2 840 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 ZWILCHQ9H900 591 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 STX18Q9P2W9 335 aaKnown RBP13.09□□□□□ -0.31
PRPF6-201ENST00000266079 BARX2Q9UMQ3 279 aaPredicted RBP13.09□□□□□ -0.31
PRPF6-201ENST00000266079 SLC4A7Q9Y6M7 1214 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 EYSQ5T1H1 3165 aa13.09□□□□□ -0.31
PRPF6-201ENST00000266079 MAP3K7O43318 606 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 PARNO95453 639 aaKnown RBP13.08□□□□□ -0.32
PRPF6-201ENST00000266079 PABPC1LQ4VXU2 614 aaKnown RBP13.08□□□□□ -0.32
PRPF6-201ENST00000266079 MTDHQ86UE4 582 aaKnown RBP13.08□□□□□ -0.32
PRPF6-201ENST00000266079 TRIM74Q86UV6 250 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 TRIM73Q86UV7 250 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 DDX1Q92499 740 aaKnown RBP13.08□□□□□ -0.32
PRPF6-201ENST00000266079 SYNCQ9H7C4 482 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 GRID1Q9ULK0 1009 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 TDRD15B5MCY1 1934 aaKnown RBP13.08□□□□□ -0.32
PRPF6-201ENST00000266079 NRP1O14786 923 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 GSC2O15499 205 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 TADA2AO75478 443 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 CCDC130P13994 396 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 ATF2P15336 505 aa13.08□□□□□ -0.32
PRPF6-201ENST00000266079 ADORA2BP29275 332 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms