RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 GPAMQ9HCL2 828 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 ZNF224Q9NZL3 707 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 GABBR1Q9UBS5 961 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 ILVBLA1L0T0 632 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 TMCC2O75069 709 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 SRP72O76094 671 aaKnown RBP5.85□□□□□ -1.47
VCAN-201ENST00000265077 CCNA2P20248 432 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 ZNF235Q14590 738 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 EEPD1Q7L9B9 569 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 KCNK18Q7Z418 384 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 URGCPQ8TCY9 931 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 STARD8Q92502 1023 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 TASP1Q9H6P5 420 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 SP140LQ9H930 580 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 AVENQ9NQS1 362 aaPredicted RBP5.85□□□□□ -1.47
VCAN-201ENST00000265077 MLXQ9UH92 298 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 INPP5FQ9Y2H2 1132 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 ADGRB2O60241 1585 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 C5orf58C9J3I9 102 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 MAGEB2O15479 319 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 AKR1B1P15121 316 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 NMT1P30419 496 aaKnown RBP5.85□□□□□ -1.47
VCAN-201ENST00000265077 GNL1P36915 607 aaPredicted RBP5.85□□□□□ -1.47
VCAN-201ENST00000265077 RASA2Q15283 850 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 MOXD1Q6UVY6 613 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 LRRC8DQ7L1W4 858 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 KYQ8NBH2 561 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 PJA1Q8NG27 643 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 PDCD10Q9BUL8 212 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 CELF4Q9BZC1 486 aaKnown RBP5.85□□□□□ -1.47
VCAN-201ENST00000265077 QPCTLQ9NXS2 382 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 MTMR4Q9NYA4 1195 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 HOXC10Q9NYD6 342 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 CNTNAP5Q8WYK1 1306 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 LAMA4Q16363 1823 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 PDPK1O15530 556 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 ITIH1P19827 911 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 IL12AP29459 219 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 PRDX5P30044 214 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 NAMPTP43490 491 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 FXNQ16595 210 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 DUS1LQ6P1R4 473 aaKnown RBP5.85□□□□□ -1.47
VCAN-201ENST00000265077 ERI1Q8IV48 349 aaKnown RBP5.85□□□□□ -1.47
VCAN-201ENST00000265077 TTC30BQ8N4P2 665 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 ZNF333Q96JL9 665 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 EPB41L4AQ9HCS5 686 aaPredicted RBP5.85□□□□□ -1.47
VCAN-201ENST00000265077 SLC38A7Q9NVC3 462 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 SEC24AO95486 1093 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 HIST1H2AGP0C0S8 130 aaPredicted RBP5.85□□□□□ -1.47
VCAN-201ENST00000265077 HIST1H2ADP20671 130 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 NUDT2P50583 147 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 UBE3AQ05086 875 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 KRT33BQ14525 404 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 SEL1L3Q68CR1 1132 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 DPY19L2Q6NUT2 758 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 MTERF3Q96E29 417 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 HIST1H2AHQ96KK5 128 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 HIST1H2AJQ99878 128 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 AIFM2Q9BRQ8 373 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 H2AFJQ9BTM1 129 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 SPATA2Q9UM82 520 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 SIK3Q9Y2K2 1263 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 A6NHS1 94 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 ZNF197O14709 1029 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 NDUFS3O75489 264 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 VAC14Q08AM6 782 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 BFSP2Q13515 415 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 HMBOX1Q6NT76 420 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 RIPOR1Q6ZS17 1223 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 IFNL1Q8IU54 200 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 SLC25A41Q8N5S1 370 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 PROX1Q92786 737 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 TMEM120AQ9BXJ8 343 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 FAIMQ9NVQ4 179 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 HPSEQ9Y251 543 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 CLRN2A0PK11 232 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 PRKAA2P54646 552 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 RHBDL3P58872 404 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 COBLL1Q53SF7 1204 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 NT5DC1Q5TFE4 455 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 MEI1Q5TIA1 1274 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 RDM1Q8NG50 284 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 ASB12Q8WXK4 309 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 FAM49AQ9H0Q0 323 aaPredicted RBP5.85□□□□□ -1.47
VCAN-201ENST00000265077 VPS45Q9NRW7 570 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 APBA3O96018 575 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 TFRCP02786 760 aaKnown RBP5.85□□□□□ -1.47
VCAN-201ENST00000265077 TPBGLP0DKB5 382 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 FOSL2P15408 326 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 VCLP18206 1134 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 ITGALP20701 1170 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 FDFT1P37268 417 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 PTENP60484 403 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 CMPK2Q5EBM0 449 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 TMEM214Q6NUQ4 689 aaKnown RBP5.85□□□□□ -1.47
VCAN-201ENST00000265077 POC5Q8NA72 575 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 SLC44A5Q8NCS7 719 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 PSMA8Q8TAA3 256 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 PLK2Q9NYY3 685 aa5.85□□□□□ -1.47
VCAN-201ENST00000265077 TRPM6Q9BX84 2022 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms