RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 ACTL7BQ9Y614 415 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 LRP5O75197 1615 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 LYPLA1O75608 230 aaPredicted RBP20.45■□□□□ 0.86
CSPG5-201ENST00000264723 F7P08709 466 aaPredicted RBP20.45■□□□□ 0.86
CSPG5-201ENST00000264723 GPR142Q7Z601 462 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 ANKS1BQ7Z6G8 1248 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 SPATA24Q86W54 205 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 NDRG1Q92597 394 aaKnown RBP20.45■□□□□ 0.86
CSPG5-201ENST00000264723 LRGUKQ96M69 825 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 WDCPQ9H6R7 721 aa20.45■□□□□ 0.86
CSPG5-201ENST00000264723 MAFBQ9Y5Q3 323 aaPredicted RBP20.45■□□□□ 0.86
CSPG5-201ENST00000264723 MGAT1P26572 445 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 SERPINB5P36952 375 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 PNPLA4P41247 253 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 CASP2P42575 452 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 RBBP5Q15291 538 aaKnown RBP20.44■□□□□ 0.86
CSPG5-201ENST00000264723 MGAT5BQ3V5L5 792 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 TCHHL1Q5QJ38 904 aaPredicted RBP20.44■□□□□ 0.86
CSPG5-201ENST00000264723 EMC10Q5UCC4 262 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 PLPPR4Q7Z2D5 763 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 FAM228AQ86W67 206 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 C18orf25Q96B23 403 aaPredicted RBP20.44■□□□□ 0.86
CSPG5-201ENST00000264723 SP110Q9HB58 689 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 FZD9O00144 591 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 TRUB2O95900 331 aaKnown RBP20.44■□□□□ 0.86
CSPG5-201ENST00000264723 ABHD2P08910 425 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 ARL2P36404 184 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 SLC25A3Q00325 362 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 IZUMO2Q6UXV1 221 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 GALNT4Q8N4A0 578 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 TFB1MQ8WVM0 346 aaKnown RBP20.44■□□□□ 0.86
CSPG5-201ENST00000264723 CELF6Q96J87 481 aaKnown RBP20.44■□□□□ 0.86
CSPG5-201ENST00000264723 LPIN3Q9BQK8 851 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 NXF3Q9H4D5 531 aaKnown RBP20.44■□□□□ 0.86
CSPG5-201ENST00000264723 DONSONQ9NYP3 566 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 PRRC2BQ5JSZ5 2229 aaKnown RBP20.44■□□□□ 0.86
CSPG5-201ENST00000264723 C2CD2LO14523 706 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 UGT1A9O60656 530 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 COG7P83436 770 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 CDK16Q00536 496 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 DEFB106AQ8N104 65 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 TMA16Q96EY4 203 aaKnown RBP20.44■□□□□ 0.86
CSPG5-201ENST00000264723 FGD4Q96M96 766 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 TASP1Q9H6P5 420 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 UGT1A7Q9HAW7 530 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 UGT1A10Q9HAW8 530 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 UGT1A8Q9HAW9 530 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 MAN1C1Q9NR34 630 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 C20orf96Q9NUD7 363 aaPredicted RBP20.44■□□□□ 0.86
CSPG5-201ENST00000264723 RBPJLQ9UBG7 517 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 RABGEF1Q9UJ41 708 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 MYH4Q9Y623 1939 aa20.44■□□□□ 0.86
CSPG5-201ENST00000264723 IVDP26440 423 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 TSTA3Q13630 321 aaPredicted RBP20.43■□□□□ 0.86
CSPG5-201ENST00000264723 UBAP2LQ14157 1087 aaKnown RBP20.43■□□□□ 0.86
CSPG5-201ENST00000264723 PDK1Q15118 436 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 COLGALT1Q8NBJ5 622 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 PYDC1Q8WXC3 89 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 VPS39Q96JC1 886 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 FBXL18Q96ME1 805 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 LGMNQ99538 433 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 SNRNP25Q9BV90 132 aaKnown RBP20.43■□□□□ 0.86
CSPG5-201ENST00000264723 hCG_2014768A0A024R1R8 64 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 BTBD19C9JJ37 291 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 MT-CO1P00395 513 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 APOEP02649 317 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 ERVK-10P10266 1014 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 PRAMEP78395 509 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 KHDC1Q4VXA5 237 aaKnown RBP20.43■□□□□ 0.86
CSPG5-201ENST00000264723 LRRC38Q5VT99 294 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 ITPRIPL1Q6GPH6 555 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 SARS2Q9NP81 518 aaKnown RBP20.43■□□□□ 0.86
CSPG5-201ENST00000264723 C3orf70A6NLC5 250 aaPredicted RBP20.43■□□□□ 0.86
CSPG5-201ENST00000264723 SPAG6O75602 509 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 ATXN1P54253 815 aaKnown RBP20.43■□□□□ 0.86
CSPG5-201ENST00000264723 ATP6V1E2Q96A05 226 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 SERAC1Q96JX3 654 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 GLT1D1Q96MS3 346 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 LGR5O75473 907 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 ETFBP38117 255 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 BST2Q10589 180 aaKnown RBP20.43■□□□□ 0.86
CSPG5-201ENST00000264723 LAYNQ6UX15 382 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 TWNKQ96RR1 684 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 NENFQ9UMX5 172 aa20.43■□□□□ 0.86
CSPG5-201ENST00000264723 PSEN2P49810 448 aa20.42■□□□□ 0.86
CSPG5-201ENST00000264723 ELOVL4Q9GZR5 314 aa20.42■□□□□ 0.86
CSPG5-201ENST00000264723 XAB2Q9HCS7 855 aaKnown RBP20.42■□□□□ 0.86
CSPG5-201ENST00000264723 ZMYND8Q9ULU4 1186 aaPredicted RBP20.42■□□□□ 0.86
CSPG5-201ENST00000264723 GBE1Q04446 702 aa20.42■□□□□ 0.86
CSPG5-201ENST00000264723 USP10Q14694 798 aaKnown RBP20.42■□□□□ 0.86
CSPG5-201ENST00000264723 MTHFD1LQ6UB35 978 aa20.42■□□□□ 0.86
CSPG5-201ENST00000264723 C1orf127Q8N9H9 656 aa20.42■□□□□ 0.86
CSPG5-201ENST00000264723 RNF157Q96PX1 679 aa20.42■□□□□ 0.86
CSPG5-201ENST00000264723 ETNK2Q9NVF9 386 aa20.42■□□□□ 0.86
CSPG5-201ENST00000264723 ANKRD36CQ5JPF3 1778 aa20.42■□□□□ 0.86
CSPG5-201ENST00000264723 JCHAINP01591 159 aa20.42■□□□□ 0.86
CSPG5-201ENST00000264723 KLRC2P26717 231 aa20.42■□□□□ 0.86
CSPG5-201ENST00000264723 DBN1Q16643 649 aa20.42■□□□□ 0.86
CSPG5-201ENST00000264723 WSCD1Q658N2 575 aa20.42■□□□□ 0.86
CSPG5-201ENST00000264723 LPPQ93052 612 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms