RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 VCPKMTQ9H867 229 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 RAD54BQ9Y620 910 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 USP6P35125 1406 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 C17orf102A2RUQ5 167 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 TAF4O00268 1085 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 SEC22BO75396 215 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 KRT6BP04259 564 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 KRT6CP48668 564 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 PKN1Q16512 942 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 TIGD7Q6NT04 549 aaPredicted RBP15.47■□□□□ 0.07
NID1-201ENST00000264187 TFAP2DQ7Z6R9 452 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 KYQ8NBH2 561 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 COLGALT1Q8NBJ5 622 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 UCMAQ8WVF2 138 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 RMND5BQ96G75 393 aaPredicted RBP15.47■□□□□ 0.07
NID1-201ENST00000264187 JMJD4Q9H9V9 463 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 ZFYVE28Q9HCC9 887 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 OSGEPQ9NPF4 335 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 TCOF1Q13428 1488 aaKnown RBP15.47■□□□□ 0.07
NID1-201ENST00000264187 RRN3P2A6NIE6 340 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 O00370 1275 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 RAG1P15918 1043 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 PTSQ03393 145 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 LPIN1Q14693 890 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 NT5DC4Q86YG4 428 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 FBXO25Q8TCJ0 367 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 LPAR1Q92633 364 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 RORBQ92753 470 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 TMEM39BQ9GZU3 492 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 GGA3Q9NZ52 723 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 CDHR2Q9BYE9 1310 aa15.47■□□□□ 0.07
NID1-201ENST00000264187 LOC100506127A0A0U1RQW1 187 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 PPP1R3GB7ZBB8 358 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 FAM86B2P0C5J1 330 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 MYL12AP19105 171 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 ERVK-24P63145 666 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 N4BP2L1Q5TBK1 243 aaPredicted RBP15.46■□□□□ 0.07
NID1-201ENST00000264187 S100A13Q99584 98 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 COLEC11Q9BWP8 271 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 USP18Q9UMW8 372 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 CAPN6Q9Y6Q1 641 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 IFRD1O00458 451 aaPredicted RBP15.46■□□□□ 0.07
NID1-201ENST00000264187 ATP6V1G2O95670 118 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 RPA1P27694 616 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 SLC1A6P48664 564 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 TRAF3Q13114 568 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 CDC73Q6P1J9 531 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 KIAA0408Q6ZU52 694 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 SLC26A11Q86WA9 606 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 DHFR2Q86XF0 187 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 ADGRF2Q8IZF7 708 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 TCF7L2Q9NQB0 619 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 ZNF70Q9UC06 446 aaPredicted RBP15.46■□□□□ 0.07
NID1-201ENST00000264187 SH3GLB1Q9Y371 365 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 CCL15-CCL14A0A0B4J2E2 113 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 SYNCRIPO60506 623 aaKnown RBP15.46■□□□□ 0.07
NID1-201ENST00000264187 CYP2C8P10632 490 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 GARTP22102 1010 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 TAF13Q15543 124 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 CCL15Q16663 113 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 R3HCC1LQ7Z5L2 792 aaKnown RBP15.46■□□□□ 0.07
NID1-201ENST00000264187 EDEM1Q92611 657 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 MID1IP1Q9NPA3 183 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 ARMCX1Q9P291 453 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 MRPS7Q9Y2R9 242 aaKnown RBP15.46■□□□□ 0.07
NID1-201ENST00000264187 TFRCP02786 760 aaKnown RBP15.46■□□□□ 0.07
NID1-201ENST00000264187 TPBGLP0DKB5 382 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 PABPC1P11940 636 aaKnown RBP15.46■□□□□ 0.07
NID1-201ENST00000264187 PTPN4P29074 926 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 CTXN3Q4LDR2 81 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 DOK6Q6PKX4 331 aa15.46■□□□□ 0.07
NID1-201ENST00000264187 ARHGAP31Q2M1Z3 1444 aa15.46■□□□□ 0.06
NID1-201ENST00000264187 MTRF1O75570 445 aaKnown RBP15.46■□□□□ 0.06
NID1-201ENST00000264187 ACADMP11310 421 aa15.46■□□□□ 0.06
NID1-201ENST00000264187 RRM1P23921 792 aa15.46■□□□□ 0.06
NID1-201ENST00000264187 HK2P52789 917 aa15.46■□□□□ 0.06
NID1-201ENST00000264187 PPIDQ08752 370 aaKnown RBP15.46■□□□□ 0.06
NID1-201ENST00000264187 R3HDM1Q15032 1099 aaKnown RBP15.46■□□□□ 0.06
NID1-201ENST00000264187 TSNQ15631 228 aaKnown RBP15.46■□□□□ 0.06
NID1-201ENST00000264187 DSG4Q86SJ6 1040 aa15.46■□□□□ 0.06
NID1-201ENST00000264187 RHBGQ9H310 441 aa15.46■□□□□ 0.06
NID1-201ENST00000264187 ATXN3LQ9H3M9 355 aa15.46■□□□□ 0.06
NID1-201ENST00000264187 VANGL2Q9ULK5 521 aa15.46■□□□□ 0.06
NID1-201ENST00000264187 MSH4O15457 936 aa15.45■□□□□ 0.06
NID1-201ENST00000264187 FCGR1AP12314 374 aa15.45■□□□□ 0.06
NID1-201ENST00000264187 PLK1P53350 603 aa15.45■□□□□ 0.06
NID1-201ENST00000264187 FAM20CQ8IXL6 584 aa15.45■□□□□ 0.06
NID1-201ENST00000264187 TINF2Q9BSI4 451 aa15.45■□□□□ 0.06
NID1-201ENST00000264187 TIMM13Q9Y5L4 95 aaPredicted RBP15.45■□□□□ 0.06
NID1-201ENST00000264187 ATP7AQ04656 1500 aa15.45■□□□□ 0.06
NID1-201ENST00000264187 C19orf81C9J6K1 198 aa15.45■□□□□ 0.06
NID1-201ENST00000264187 EN1Q05925 392 aaPredicted RBP15.45■□□□□ 0.06
NID1-201ENST00000264187 SPANXN2Q5MJ10 180 aa15.45■□□□□ 0.06
NID1-201ENST00000264187 ATAD3BQ5T9A4 648 aa15.45■□□□□ 0.06
NID1-201ENST00000264187 HLA-DQA1Q5Y7H0 255 aa15.45■□□□□ 0.06
NID1-201ENST00000264187 SPOCD1Q6ZMY3 1216 aa15.45■□□□□ 0.06
NID1-201ENST00000264187 SLC9A7Q96T83 725 aa15.45■□□□□ 0.06
NID1-201ENST00000264187 EMILIN2Q9BXX0 1053 aa15.45■□□□□ 0.06
NID1-201ENST00000264187 EPB41L4AQ9HCS5 686 aaPredicted RBP15.45■□□□□ 0.06
NID1-201ENST00000264187 RPRD1BQ9NQG5 326 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms