RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 ZNF214Q9UL59 606 aaPredicted RBP16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 ACKR2O00590 384 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 EDN1P05305 212 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 OLIG2Q13516 323 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 BEST2Q8NFU1 509 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 TFB1MQ8WVM0 346 aaKnown RBP16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 OSMRQ99650 979 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 ZNF358Q9NW07 568 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 BTBD7Q9P203 1132 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 SNCAIPQ9Y6H5 919 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 SCN7AQ01118 1682 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 CXCL11O14625 94 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 SLC1A6P48664 564 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 PPP1R26Q5T8A7 1209 aaPredicted RBP16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 CDHR3Q6ZTQ4 885 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 CCNJLQ8IV13 435 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 LRRC43Q8N309 656 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 CAB39LQ9H9S4 337 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 EBF2Q9HAK2 575 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 PRMT7Q9NVM4 692 aaPredicted RBP16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 TPST1O60507 370 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 TBX10O75333 385 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 RALBP11234 206 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 GOT1P17174 413 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 NME5P56597 212 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 DBN1Q16643 649 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 DNAL1Q4LDG9 190 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 PLEKHG4Q58EX7 1191 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 LPCAT4Q643R3 524 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 STRA8Q7Z7C7 330 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 ICA1LQ8NDH6 482 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 OR6J1Q8NGC5 347 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 CLEC4CQ8WTT0 213 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 HDAC11Q96DB2 347 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 MINDY3Q9H8M7 445 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 TNRC6CQ9HCJ0 1690 aaKnown RBP16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 ALADP13716 330 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 DSG1Q02413 1049 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 OASLQ15646 514 aaKnown RBP16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 TMPRSS6Q8IU80 811 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 OLIG1Q8TAK6 271 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 EDEM1Q92611 657 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 AZIN2Q96A70 460 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 ARAP2Q8WZ64 1704 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 PDHXO00330 501 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 PHGDHO43175 533 aaKnown RBP16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 SEC24DO94855 1032 aaPredicted RBP16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 TGM2P21980 687 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 YWHAZP63104 245 aaKnown RBP16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 PRAMEP78395 509 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 DEUP1Q05D60 604 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 CNGA3Q16281 694 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 LRRC38Q5VT99 294 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 UNC5AQ6ZN44 842 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 IPMKQ8NFU5 416 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 MOCOSQ96EN8 888 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 CNBD2Q96M20 576 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 GCNAQ96QF7 691 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 FARP2O94887 1054 aaPredicted RBP16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 CSH1P0DML2 217 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 CSH2P0DML3 217 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 ATP6V1C1P21283 382 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 GNL1P36915 607 aaPredicted RBP16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 PGGT1BP53609 377 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 TPI1P60174 286 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 ADGRD1Q6QNK2 874 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 PDZD4Q76G19 769 aaPredicted RBP16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 SLC35B2Q8TB61 432 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 UTP4Q969X6 686 aaKnown RBP16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 PPCSQ9HAB8 311 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 MAP3K20Q9NYL2 800 aaKnown RBP16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 ERAP1Q9NZ08 941 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 BARX2Q9UMQ3 279 aaPredicted RBP16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 LRCH1Q9Y2L9 728 aa16.68■□□□□ 0.26
PDZRN3-201ENST00000263666 HBP1O60381 514 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 PGM3O95394 542 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 CTSHP09668 335 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 PSMB4P28070 264 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 RALGPS1Q5JS13 557 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 B3GNT9Q6UX72 402 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 MIPOL1Q8TD10 442 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 SLCO2A1Q92959 643 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 CENPKQ9BS16 269 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 SHANK3Q9BYB0 1731 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 TRPV6Q9H1D0 765 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 SAR1AQ9NR31 198 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 SETD4Q9NVD3 440 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 APPL1Q9UKG1 709 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 RNF103O00237 685 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 EEF2KO00418 725 aaKnown RBP16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 HNRNPCL1O60812 293 aaKnown RBP16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 DNAJC6O75061 913 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 SPAG6O75602 509 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 PLD5Q8N7P1 536 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 BANPQ8N9N5 519 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 OR6P1Q8NGX9 317 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 MAGEC3Q8TD91 643 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 SLC2A14Q8TDB8 520 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 GOLGA2P5Q9HBQ8 144 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 IARS2Q9NSE4 1012 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms