RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 RNF34Q969K3 372 aa23.55■■□□□ 1.36
UFD1-201ENST00000263202 TKTL2Q9H0I9 626 aa23.55■■□□□ 1.36
UFD1-201ENST00000263202 PLEKHA4Q9H4M7 779 aa23.55■■□□□ 1.36
UFD1-201ENST00000263202 MAN1C1Q9NR34 630 aa23.55■■□□□ 1.36
UFD1-201ENST00000263202 TMEM51Q9NW97 253 aa23.55■■□□□ 1.36
UFD1-201ENST00000263202 TLR6Q9Y2C9 796 aa23.55■■□□□ 1.36
UFD1-201ENST00000263202 MYO7AQ13402 2215 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 GOLGA6L10A0A0M3HER8 536 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 TJP3O95049 919 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 EPCAMP16422 314 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 TUBB4BP68371 445 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 NAA30Q147X3 362 aaPredicted RBP23.54■■□□□ 1.36
UFD1-201ENST00000263202 PPP6R3Q5H9R7 873 aaPredicted RBP23.54■■□□□ 1.36
UFD1-201ENST00000263202 EFHC2Q5JST6 749 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 BRMS1LQ5PSV4 323 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 PPM1LQ5SGD2 360 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 RTL10Q7L3V2 364 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 ADGRD2Q7Z7M1 963 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 TMEM150AQ86TG1 271 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 TSC1Q92574 1164 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 CDK5RAP1Q96SZ6 601 aaKnown RBP23.54■■□□□ 1.36
UFD1-201ENST00000263202 ARHGEF38Q9NXL2 777 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 ZNF487B1APH4 448 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 PER2O15055 1255 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 F11P03951 625 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 RGS19P49795 217 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 NNTQ13423 1086 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 PPP2R5DQ14738 602 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 ERCC6LQ2NKX8 1250 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 UBXN4Q92575 508 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 SLC39A13Q96H72 371 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 ZNF670Q9BS34 389 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 LRRC3Q9BY71 257 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 IL21Q9HBE4 155 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 MARCH2Q9P0N8 246 aa23.54■■□□□ 1.36
UFD1-201ENST00000263202 CCR1P32246 355 aa23.53■■□□□ 1.36
UFD1-201ENST00000263202 CYP1B1Q16678 543 aa23.53■■□□□ 1.36
UFD1-201ENST00000263202 HECTD3Q5T447 861 aa23.53■■□□□ 1.36
UFD1-201ENST00000263202 TMC8Q8IU68 726 aa23.53■■□□□ 1.36
UFD1-201ENST00000263202 KLHL7Q8IXQ5 586 aa23.53■■□□□ 1.36
UFD1-201ENST00000263202 FAF2Q96CS3 445 aa23.53■■□□□ 1.36
UFD1-201ENST00000263202 RNF157Q96PX1 679 aa23.53■■□□□ 1.36
UFD1-201ENST00000263202 KRT12Q99456 494 aa23.53■■□□□ 1.36
UFD1-201ENST00000263202 DDX47Q9H0S4 455 aaKnown RBP23.53■■□□□ 1.36
UFD1-201ENST00000263202 RASAL2Q9UJF2 1139 aa23.53■■□□□ 1.36
UFD1-201ENST00000263202 UQCRHLA0A096LP55 91 aa23.52■■□□□ 1.36
UFD1-201ENST00000263202 ZMYND10O75800 440 aa23.52■■□□□ 1.36
UFD1-201ENST00000263202 UQCRHP07919 91 aa23.52■■□□□ 1.36
UFD1-201ENST00000263202 ATP5C1P36542 298 aaKnown RBP23.52■■□□□ 1.36
UFD1-201ENST00000263202 TUBP50607 506 aa23.52■■□□□ 1.36
UFD1-201ENST00000263202 TRIP4Q15650 581 aaPredicted RBP23.52■■□□□ 1.36
UFD1-201ENST00000263202 ANKRD20A8PQ5CZ79 823 aa23.52■■□□□ 1.36
UFD1-201ENST00000263202 TADA2BQ86TJ2 420 aa23.52■■□□□ 1.36
UFD1-201ENST00000263202 RBM23Q86U06 439 aaKnown RBP23.52■■□□□ 1.36
UFD1-201ENST00000263202 MIB1Q86YT6 1006 aa23.52■■□□□ 1.36
UFD1-201ENST00000263202 RFX6Q8HWS3 928 aa23.52■■□□□ 1.36
UFD1-201ENST00000263202 ELMOD1Q8N336 334 aa23.52■■□□□ 1.36
UFD1-201ENST00000263202 TIFAQ96CG3 184 aa23.52■■□□□ 1.36
UFD1-201ENST00000263202 FCRL2Q96LA5 508 aaPredicted RBP23.52■■□□□ 1.36
UFD1-201ENST00000263202 PRO3102Q9H379 93 aa23.52■■□□□ 1.36
UFD1-201ENST00000263202 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.52■■□□□ 1.36
UFD1-201ENST00000263202 R3HDM2Q9Y2K5 976 aaKnown RBP23.52■■□□□ 1.36
UFD1-201ENST00000263202 CCL16O15467 120 aa23.52■■□□□ 1.36
UFD1-201ENST00000263202 CST8O60676 142 aa23.52■■□□□ 1.36
UFD1-201ENST00000263202 PHF2O75151 1096 aa23.52■■□□□ 1.36
UFD1-201ENST00000263202 TBX4P57082 545 aa23.52■■□□□ 1.36
UFD1-201ENST00000263202 SMAD3P84022 425 aaKnown RBP23.52■■□□□ 1.36
UFD1-201ENST00000263202 KLHDC10Q6PID8 442 aa23.52■■□□□ 1.36
UFD1-201ENST00000263202 BBS12Q6ZW61 710 aa23.52■■□□□ 1.36
UFD1-201ENST00000263202 HS6ST3Q8IZP7 471 aa23.52■■□□□ 1.36
UFD1-201ENST00000263202 HDAC7Q8WUI4 952 aa23.52■■□□□ 1.36
UFD1-201ENST00000263202 MAK16Q9BXY0 300 aaKnown RBP23.52■■□□□ 1.36
UFD1-201ENST00000263202 CWC15Q9P013 229 aaKnown RBP23.52■■□□□ 1.36
UFD1-201ENST00000263202 DNMT3LQ9UJW3 386 aa23.52■■□□□ 1.36
UFD1-201ENST00000263202 KCNU1A8MYU2 1149 aa23.51■■□□□ 1.35
UFD1-201ENST00000263202 COCHO43405 550 aa23.51■■□□□ 1.35
UFD1-201ENST00000263202 RFPL2O75678 378 aa23.51■■□□□ 1.35
UFD1-201ENST00000263202 SEMA3BQ13214 749 aa23.51■■□□□ 1.35
UFD1-201ENST00000263202 PABPC1LQ4VXU2 614 aaKnown RBP23.51■■□□□ 1.35
UFD1-201ENST00000263202 C12orf50Q8NA57 414 aaPredicted RBP23.51■■□□□ 1.35
UFD1-201ENST00000263202 PCDH19Q8TAB3 1148 aa23.51■■□□□ 1.35
UFD1-201ENST00000263202 C1orf54Q8WWF1 131 aa23.51■■□□□ 1.35
UFD1-201ENST00000263202 CSPG4P5Q96PW8 444 aa23.51■■□□□ 1.35
UFD1-201ENST00000263202 RCOR3Q9P2K3 495 aaPredicted RBP23.51■■□□□ 1.35
UFD1-201ENST00000263202 HCFC2Q9Y5Z7 792 aa23.51■■□□□ 1.35
UFD1-201ENST00000263202 SLC12A8A0AV02 714 aa23.5■■□□□ 1.35
UFD1-201ENST00000263202 FAM72CH0Y354 149 aa23.5■■□□□ 1.35
UFD1-201ENST00000263202 OAS1P00973 400 aaKnown RBP23.5■■□□□ 1.35
UFD1-201ENST00000263202 IGLV3-27P01718 113 aa23.5■■□□□ 1.35
UFD1-201ENST00000263202 GOT1P17174 413 aa23.5■■□□□ 1.35
UFD1-201ENST00000263202 HOXA9P31269 272 aa23.5■■□□□ 1.35
UFD1-201ENST00000263202 DYNLT1P63172 113 aa23.5■■□□□ 1.35
UFD1-201ENST00000263202 FAM72AQ5TYM5 149 aa23.5■■□□□ 1.35
UFD1-201ENST00000263202 FAM72DQ6L9T8 149 aa23.5■■□□□ 1.35
UFD1-201ENST00000263202 CHRDL2Q6WN34 429 aa23.5■■□□□ 1.35
UFD1-201ENST00000263202 FAM72BQ86X60 149 aa23.5■■□□□ 1.35
UFD1-201ENST00000263202 MAGOHBQ96A72 148 aaKnown RBP23.5■■□□□ 1.35
UFD1-201ENST00000263202 HAPLN3Q96S86 360 aa23.5■■□□□ 1.35
UFD1-201ENST00000263202 LRRC1Q9BTT6 524 aa23.5■■□□□ 1.35
UFD1-201ENST00000263202 DCLK3Q9C098 648 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms