RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 EIF1ADQ8N9N8 165 aaKnown RBP23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 WDCPQ9H6R7 721 aa23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 ARFGAP3Q9NP61 516 aa23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 TLR8Q9NR97 1041 aaKnown RBP23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 SAE1Q9UBE0 346 aaPredicted RBP23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 LZTS1Q9Y250 596 aa23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 DRG1Q9Y295 367 aaKnown RBP23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 YIPF1Q9Y548 306 aa23.76■■□□□ 1.39
SMARCB1-201ENST00000263121 PECAM1P16284 738 aaPredicted RBP23.75■■□□□ 1.39
SMARCB1-201ENST00000263121 CUL1Q13616 776 aa23.75■■□□□ 1.39
SMARCB1-201ENST00000263121 BEND6Q5SZJ8 279 aaPredicted RBP23.75■■□□□ 1.39
SMARCB1-201ENST00000263121 TCEAL8Q8IYN2 117 aa23.75■■□□□ 1.39
SMARCB1-201ENST00000263121 PLD5Q8N7P1 536 aa23.75■■□□□ 1.39
SMARCB1-201ENST00000263121 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.75■■□□□ 1.39
SMARCB1-201ENST00000263121 TMEM51Q9NW97 253 aa23.75■■□□□ 1.39
SMARCB1-201ENST00000263121 NEU2Q9Y3R4 380 aa23.75■■□□□ 1.39
SMARCB1-201ENST00000263121 LINC01553A4QN01 128 aa23.74■■□□□ 1.39
SMARCB1-201ENST00000263121 APOL1O14791 398 aa23.74■■□□□ 1.39
SMARCB1-201ENST00000263121 GOT1P17174 413 aa23.74■■□□□ 1.39
SMARCB1-201ENST00000263121 TGM2P21980 687 aa23.74■■□□□ 1.39
SMARCB1-201ENST00000263121 CTNNB1P35222 781 aa23.74■■□□□ 1.39
SMARCB1-201ENST00000263121 ARL4AP40617 200 aa23.74■■□□□ 1.39
SMARCB1-201ENST00000263121 DRG2P55039 364 aaKnown RBP23.74■■□□□ 1.39
SMARCB1-201ENST00000263121 SEMA3BQ13214 749 aa23.74■■□□□ 1.39
SMARCB1-201ENST00000263121 MAP9Q49MG5 647 aa23.74■■□□□ 1.39
SMARCB1-201ENST00000263121 BRMS1LQ5PSV4 323 aa23.74■■□□□ 1.39
SMARCB1-201ENST00000263121 AENQ8WTP8 325 aaKnown RBP23.74■■□□□ 1.39
SMARCB1-201ENST00000263121 CCDC114Q96M63 670 aa23.74■■□□□ 1.39
SMARCB1-201ENST00000263121 TKTL2Q9H0I9 626 aa23.74■■□□□ 1.39
SMARCB1-201ENST00000263121 ARHGEF38Q9NXL2 777 aa23.74■■□□□ 1.39
SMARCB1-201ENST00000263121 SFMBT1Q9UHJ3 866 aa23.74■■□□□ 1.39
SMARCB1-201ENST00000263121 NUDT5Q9UKK9 219 aa23.74■■□□□ 1.39
SMARCB1-201ENST00000263121 RWDD3Q9Y3V2 267 aa23.74■■□□□ 1.39
SMARCB1-201ENST00000263121 DAPK3O43293 454 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 SEC31AO94979 1220 aaKnown RBP23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 GAS8O95995 478 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 ITGAVP06756 1048 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 CNPP09543 421 aaKnown RBP23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 RARGP13631 454 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 LMNB2Q03252 620 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 PTK6Q13882 451 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 NOMO1Q15155 1222 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 DDX42Q86XP3 938 aaKnown RBP eCLIP23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 IFT81Q8WYA0 676 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 SERPINB11Q96P15 392 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 UBE2OQ9C0C9 1292 aaKnown RBP23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 PRDM16Q9HAZ2 1276 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 FAM114A2Q9NRY5 505 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 ZNF446Q9NWS9 450 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 H3BRJ5 948 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 MSI1O43347 362 aaKnown RBP23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 CSH1P0DML2 217 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 CSH2P0DML3 217 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 HMGA1P17096 107 aaKnown RBP23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 ECHS1P30084 290 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 ALDH1A3P47895 512 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 RBM10P98175 930 aaKnown RBP23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 PPP1R7Q15435 360 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 C9orf50Q5SZB4 431 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 NPNTQ6UXI9 565 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 OVCA2Q8WZ82 227 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 MYRFLQ96LU7 910 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 DPH5Q9H2P9 285 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 OLA1Q9NTK5 396 aaKnown RBP23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 NFU1Q9UMS0 254 aa23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 MAGED2Q9UNF1 606 aaPredicted RBP23.73■■□□□ 1.39
SMARCB1-201ENST00000263121 CXCL14O95715 111 aa23.72■■□□□ 1.39
SMARCB1-201ENST00000263121 ZFXP17010 805 aaPredicted RBP23.72■■□□□ 1.39
SMARCB1-201ENST00000263121 PPP2R5DQ14738 602 aa23.72■■□□□ 1.39
SMARCB1-201ENST00000263121 ALLCQ8N6M5 410 aa23.72■■□□□ 1.39
SMARCB1-201ENST00000263121 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.72■■□□□ 1.39
SMARCB1-201ENST00000263121 P3H4Q92791 437 aa23.72■■□□□ 1.39
SMARCB1-201ENST00000263121 ABHD8Q96I13 439 aa23.72■■□□□ 1.39
SMARCB1-201ENST00000263121 TRIM31Q9BZY9 425 aa23.72■■□□□ 1.39
SMARCB1-201ENST00000263121 ZNF148Q9UQR1 794 aa23.72■■□□□ 1.39
SMARCB1-201ENST00000263121 IRAK3Q9Y616 596 aa23.72■■□□□ 1.39
SMARCB1-201ENST00000263121 FAM72CH0Y354 149 aa23.71■■□□□ 1.39
SMARCB1-201ENST00000263121 PRRG1O14668 218 aa23.71■■□□□ 1.39
SMARCB1-201ENST00000263121 CCR1P32246 355 aa23.71■■□□□ 1.39
SMARCB1-201ENST00000263121 ELF1P32519 619 aa23.71■■□□□ 1.39
SMARCB1-201ENST00000263121 ZNF135P52742 658 aaPredicted RBP23.71■■□□□ 1.39
SMARCB1-201ENST00000263121 NNTQ13423 1086 aa23.71■■□□□ 1.39
SMARCB1-201ENST00000263121 FAM72AQ5TYM5 149 aa23.71■■□□□ 1.39
SMARCB1-201ENST00000263121 SNX30Q5VWJ9 437 aa23.71■■□□□ 1.39
SMARCB1-201ENST00000263121 FAM72DQ6L9T8 149 aa23.71■■□□□ 1.39
SMARCB1-201ENST00000263121 TMC7Q7Z402 723 aa23.71■■□□□ 1.39
SMARCB1-201ENST00000263121 FAM72BQ86X60 149 aa23.71■■□□□ 1.39
SMARCB1-201ENST00000263121 ZNF276Q8N554 614 aa23.71■■□□□ 1.39
SMARCB1-201ENST00000263121 PDZD8Q8NEN9 1154 aa23.71■■□□□ 1.39
SMARCB1-201ENST00000263121 RNF34Q969K3 372 aa23.71■■□□□ 1.39
SMARCB1-201ENST00000263121 TRMT2BQ96GJ1 504 aaKnown RBP23.71■■□□□ 1.39
SMARCB1-201ENST00000263121 SLC39A13Q96H72 371 aa23.71■■□□□ 1.39
SMARCB1-201ENST00000263121 OSBPL2Q9H1P3 480 aa23.71■■□□□ 1.39
SMARCB1-201ENST00000263121 ALG13Q9NP73 1137 aaKnown RBP23.71■■□□□ 1.39
SMARCB1-201ENST00000263121 ARHGEF4Q9NR80 690 aa23.71■■□□□ 1.39
SMARCB1-201ENST00000263121 TLR6Q9Y2C9 796 aa23.71■■□□□ 1.39
SMARCB1-201ENST00000263121 INSL5Q9Y5Q6 135 aa23.71■■□□□ 1.39
SMARCB1-201ENST00000263121 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.7■■□□□ 1.39
SMARCB1-201ENST00000263121 C5orf67F2Z3F1 127 aa23.7■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms