RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 KCNA4P22459 653 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 IL4RP24394 825 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 EDNRBP24530 442 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 ICAM3P32942 547 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 RPL10AP62906 217 aaKnown RBP10.4□□□□□ -0.74
LIG3-201ENST00000262327 SLC25A3Q00325 362 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 ROR2Q01974 943 aaKnown RBP10.4□□□□□ -0.74
LIG3-201ENST00000262327 GBE1Q04446 702 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 GJC2Q5T442 439 aaPredicted RBP10.4□□□□□ -0.74
LIG3-201ENST00000262327 WDR78Q5VTH9 848 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 MPZL3Q6UWV2 235 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 ISLR2Q6UXK2 745 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 UNC5AQ6ZN44 842 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 RASAL3Q86YV0 1011 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 CCNJLQ8IV13 435 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 SMC1BQ8NDV3 1235 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 PCDH19Q8TAB3 1148 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 PPP1R14CQ8TAE6 165 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 TEKT4Q8WW24 435 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 RNF157Q96PX1 679 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 CXCL16Q9H2A7 254 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 ACSS2Q9NR19 701 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 HMX2A2RU54 273 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 E7ENQ6 273 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 NOP56O00567 594 aaKnown RBP10.4□□□□□ -0.74
LIG3-201ENST00000262327 KRT37O76014 449 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 C1QAP02745 245 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 CYP2C8P10632 490 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 PHKA2P46019 1235 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 SCNN1BP51168 640 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 NDST1P52848 882 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 KCTD2Q14681 263 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 TAZQ16635 292 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 AMHR2Q16671 573 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 CES3Q6UWW8 571 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 RIPOR1Q6ZS17 1223 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 CHSY1Q86X52 802 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 PQLC3Q8N755 202 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 PPP1R13LQ8WUF5 828 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 SEPT1Q8WYJ6 367 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 FAM136AQ96C01 138 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 CCDC124Q96CT7 223 aaKnown RBP10.4□□□□□ -0.74
LIG3-201ENST00000262327 PANX3Q96QZ0 392 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 PHACTR1Q9C0D0 580 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 ETNK2Q9NVF9 386 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 TSPAN16Q9UKR8 245 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 PACSIN3Q9UKS6 424 aa10.4□□□□□ -0.74
LIG3-201ENST00000262327 CEP350Q5VT06 3117 aa10.4□□□□□ -0.75
LIG3-201ENST00000262327 DNAJC25-GNG10A0A024R161 153 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 C6orf222P0C671 652 aaPredicted RBP10.39□□□□□ -0.75
LIG3-201ENST00000262327 ZNF157P51786 506 aaPredicted RBP10.39□□□□□ -0.75
LIG3-201ENST00000262327 ZNF143P52747 638 aaPredicted RBP10.39□□□□□ -0.75
LIG3-201ENST00000262327 EFNA5P52803 228 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 AP3M2P53677 418 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 POLE2P56282 527 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 MRPS35P82673 323 aaKnown RBP10.39□□□□□ -0.75
LIG3-201ENST00000262327 RGMBQ6NW40 437 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 SAPCD2Q86UD0 394 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 SH3TC2Q8TF17 1288 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 CLEC4CQ8WTT0 213 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 FAM172AQ8WUF8 416 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 MCRS1Q96EZ8 462 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 ATXN7L3BQ96GX2 97 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 LHX5Q9H2C1 402 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 RMI1Q9H9A7 625 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 CYP4F11Q9HBI6 524 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 GPBP1L1Q9HC44 474 aaPredicted RBP10.39□□□□□ -0.75
LIG3-201ENST00000262327 FETUBQ9UGM5 382 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 EFR3BQ9Y2G0 817 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 IGKV6D-21A0A0A0MT36 114 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.39□□□□□ -0.75
LIG3-201ENST00000262327 ARHGAP42A6NI28 874 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 SLC15A5A6NIM6 579 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 ZBTB42B2RXF5 422 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 ZMPSTE24O75844 475 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 LMNAP02545 664 aaKnown RBP10.39□□□□□ -0.75
LIG3-201ENST00000262327 STAG3L1P0CL83 205 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 STIP1P31948 543 aaKnown RBP10.39□□□□□ -0.75
LIG3-201ENST00000262327 EPHB1P54762 984 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 OLIG2Q13516 323 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 CCDC14Q49A88 953 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 C1orf146Q5VVC0 180 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 FAM160B1Q5W0V3 765 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 EFCAB12Q6NXP0 572 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 SCUBE1Q8IWY4 988 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 GSTCDQ8NEC7 633 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 PPM1HQ9ULR3 514 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 C2CD2Q9Y426 696 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 TLL2Q9Y6L7 1015 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 SYNJ2BP-COX16A0A087WUM0 186 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 C2CD4BA6NLJ0 364 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 APOL1O14791 398 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 LIN7AO14910 233 aaPredicted RBP10.39□□□□□ -0.75
LIG3-201ENST00000262327 MAP3K7O43318 606 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 DNAJC6O75061 913 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 CILPO75339 1184 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 PDE5AO76074 875 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 ABCG1P45844 678 aa10.39□□□□□ -0.75
LIG3-201ENST00000262327 SLC10A2Q12908 348 aaPredicted RBP10.39□□□□□ -0.75
LIG3-201ENST00000262327 RALGPS1Q5JS13 557 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms