RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 DPYSL4O14531 572 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 LYPLA1O75608 230 aaPredicted RBP16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 SLC25A27O95847 323 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 TUBP50607 506 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 LGSNQ5TDP6 509 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 PDCD7Q8N8D1 485 aaKnown RBP16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 RBM15BQ8NDT2 890 aaKnown RBP16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 FAM161BQ96MY7 647 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 TUBB6Q9BUF5 446 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 AP4E1Q9UPM8 1137 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 C2CD2Q9Y426 696 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 E2F8A0AVK6 867 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 A6NJR5 290 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 FAM159BA6NKW6 160 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 CAPN14A8MX76 684 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 MDM4O15151 490 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 PSMG1O95456 288 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 GOT1P17174 413 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 CCNFP41002 786 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 MAGEA6P43360 314 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 UBAP2LQ14157 1087 aaKnown RBP16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 KIZQ2M2Z5 673 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 ARMCX2Q7L311 632 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 STKLD1Q8NE28 680 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 SHKBP1Q8TBC3 707 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 C7orf26Q96N11 449 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 RILPQ96NA2 401 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 KCTD15Q96SI1 283 aaPredicted RBP16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 KCNK4Q9NYG8 393 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 DTLQ9NZJ0 730 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 GJD2Q9UKL4 321 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 KIAA1257Q9ULG3 409 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 WASF2Q9Y6W5 498 aa16.91■□□□□ 0.3
TM9SF1-201ENST00000261789 NVLO15381 856 aaKnown RBP16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 ITM2AO43736 263 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 LUC7L3O95232 432 aaKnown RBP16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 NPTXRO95502 500 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 F7P08709 466 aaPredicted RBP16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 VAV1P15498 845 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 ZNF484Q5JVG2 852 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 ATG16L1Q676U5 607 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 LINC01465Q8N7H1 131 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 MCUQ8NE86 351 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 CSPG4P5Q96PW8 444 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 STOML1Q9UBI4 398 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 SYNJ2BP-COX16A0A087WUM0 186 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 DDNO94850 711 aaPredicted RBP16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 BPGMP07738 259 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 LMO2P25791 158 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 SESN2P58004 480 aaPredicted RBP16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 NBPF20Q3BBV1 942 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 ZNF618Q5T7W0 954 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 HEATR6Q6AI08 1181 aaKnown RBP16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 MTHFD1LQ6UB35 978 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 SESTD1Q86VW0 696 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 FAM131BQ86XD5 332 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 CDKL3Q8IVW4 592 aaPredicted RBP16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 SMC1BQ8NDV3 1235 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 UCMAQ8WVF2 138 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 SCG3Q8WXD2 468 aaKnown RBP16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 ZNF333Q96JL9 665 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 TBCBQ99426 244 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 FRMD8Q9BZ67 464 aaPredicted RBP16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 COX16Q9P0S2 106 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 RPL26L1Q9UNX3 145 aaKnown RBP16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 PCDHA11Q9Y5I1 949 aa16.9■□□□□ 0.3
TM9SF1-201ENST00000261789 DPPA5A6NC42 116 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 A8MXQ7 604 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 PRR5-ARHGAP8B1AHC4 643 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 GCATO75600 419 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 IL1BP01584 269 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 LMNAP02545 664 aaKnown RBP16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 KCNA4P22459 653 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 RPL10AP62906 217 aaKnown RBP16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 ARHGAP8P85298 464 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 OLIG2Q13516 323 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 DPYSL2Q16555 572 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 NCBP2-AS2Q69YL0 99 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 CES3Q6UWW8 571 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 CRLF3Q8IUI8 442 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 SH3TC2Q8TF17 1288 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 APOL6Q9BWW8 343 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 EIF2AQ9BY44 585 aaKnown RBP16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 HBS1LQ9Y450 684 aaKnown RBP16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 PSAT1Q9Y617 370 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 OTOFQ9HC10 1997 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 GSRP00390 522 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 LINGO3P0C6S8 592 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 CRHR1P34998 444 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 VHLP40337 213 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 PEX19P40855 299 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 ADCYAP1R1P41586 468 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 ATG14Q6ZNE5 492 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 STMN2Q93045 179 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 ZFATQ9P243 1243 aa16.89■□□□□ 0.29
TM9SF1-201ENST00000261789 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 A6NHS1 94 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 MEI4A8MW99 385 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 SNNO75324 88 aaPredicted RBP16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 ALDOAP04075 364 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms