RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 EXD1Q8NHP7 514 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 TMC2Q8TDI7 906 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 GMCL1Q96IK5 515 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 ATXN3LQ9H3M9 355 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 GBA2Q9HCG7 927 aaPredicted RBP12.41□□□□□ -0.42
COL8A1-201ENST00000261037 INTS13Q9NVM9 706 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 CALCAP01258 141 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 AMPD1P23109 780 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 GRK3P35626 688 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 FEN1P39748 380 aaKnown RBP12.41□□□□□ -0.42
COL8A1-201ENST00000261037 SCTRP47872 440 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 N4BP2L1Q5TBK1 243 aaPredicted RBP12.41□□□□□ -0.42
COL8A1-201ENST00000261037 TMC7Q7Z402 723 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 SLC26A11Q86WA9 606 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 MYCBPAPQ8TBZ2 947 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 FBXO25Q8TCJ0 367 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 ACTRT1Q8TDG2 376 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 GFM2Q969S9 779 aaKnown RBP12.41□□□□□ -0.42
COL8A1-201ENST00000261037 CCDC3Q9BQI4 270 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 ELOVL6Q9H5J4 265 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 MRGBPQ9NV56 204 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 TBC1D13Q9NVG8 400 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 IPPQ9Y573 584 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 COPG1Q9Y678 874 aaKnown RBP12.41□□□□□ -0.42
COL8A1-201ENST00000261037 MST1RQ04912 1400 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 ALDH2P05091 517 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 SLC1A6P48664 564 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 HSPA13P48723 471 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 PKN1Q16512 942 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 C4orf19Q8IY42 314 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 KIAA0895Q8NCT3 520 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 SEPHS2Q99611 448 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 ZNF518BQ9C0D4 1074 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 KBTBD4Q9NVX7 518 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 RHBDL2Q9NX52 303 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 ZMYM5Q9UJ78 669 aa12.41□□□□□ -0.42
COL8A1-201ENST00000261037 PSMC3P17980 439 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 DSG3P32926 999 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 CDH8P55286 799 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 TBX4P57082 545 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 VAC14Q08AM6 782 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 NR6A1Q15406 480 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 OVOS1Q6IE37 1185 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 MOXD1Q6UVY6 613 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 SV2AQ7L0J3 742 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 LUZP2Q86TE4 346 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 CYP4Z1Q86W10 505 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 SCUBE3Q8IX30 993 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 DCLK3Q9C098 648 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 NDEL1Q9GZM8 345 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 LACRTQ9GZZ8 138 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 SPATC1LQ9H0A9 340 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 IGFLR1Q9H665 355 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 LNPEPQ9UIQ6 1025 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 ACOT9Q9Y305 439 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 ARHGEF28Q8N1W1 1705 aaKnown RBP12.4□□□□□ -0.42
COL8A1-201ENST00000261037 LACTBL1A8MY62 500 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 HOXA2O43364 376 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 GHRP10912 638 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 BOP1Q14137 746 aaKnown RBP12.4□□□□□ -0.42
COL8A1-201ENST00000261037 MFSD10Q14728 455 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 FAM171A1Q5VUB5 890 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 METTL7BQ6UX53 244 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 MCOLN2Q8IZK6 566 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 PDCD2LQ9BRP1 358 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 MIEF1Q9NQG6 463 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 SEPT3Q9UH03 358 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 H3BRB1 525 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 GLI1P08151 1106 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 TUBP50607 506 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 ACOX1Q15067 660 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 EARS2Q5JPH6 523 aaKnown RBP12.4□□□□□ -0.42
COL8A1-201ENST00000261037 CBWD3Q5JTY5 395 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 TCHHL1Q5QJ38 904 aaPredicted RBP12.4□□□□□ -0.42
COL8A1-201ENST00000261037 CBWD5Q5RIA9 395 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 MTSS1LQ765P7 747 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 ZNF438Q7Z4V0 828 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 CCNJLQ8IV13 435 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 ABRAQ8N0Z2 381 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 TPD52L3Q96J77 140 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 CAMKK2Q96RR4 588 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 PDGFDQ9GZP0 370 aaPredicted RBP12.4□□□□□ -0.42
COL8A1-201ENST00000261037 RNPEPQ9H4A4 650 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 TUT1Q9H6E5 874 aaKnown RBP12.4□□□□□ -0.42
COL8A1-201ENST00000261037 ACTR8Q9H981 624 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 CYP39A1Q9NYL5 469 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 PLA2G4CQ9UP65 541 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 ADM5C9JUS6 153 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 LSM8O95777 96 aaKnown RBP12.4□□□□□ -0.42
COL8A1-201ENST00000261037 OR1E1P30953 314 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 ANXA11P50995 505 aaKnown RBP12.4□□□□□ -0.42
COL8A1-201ENST00000261037 TRIM25Q14258 630 aaKnown RBP12.4□□□□□ -0.42
COL8A1-201ENST00000261037 CCDC92Q53HC0 331 aaPredicted RBP12.4□□□□□ -0.42
COL8A1-201ENST00000261037 NECAB2Q7Z6G3 386 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 FAM153AQ9UHL3 310 aa12.4□□□□□ -0.42
COL8A1-201ENST00000261037 MAGEA13PA6NCF6 341 aa12.4□□□□□ -0.43
COL8A1-201ENST00000261037 RARGP13631 454 aa12.4□□□□□ -0.43
COL8A1-201ENST00000261037 TNNI3P19429 210 aa12.4□□□□□ -0.43
COL8A1-201ENST00000261037 KLRC2P26717 231 aa12.4□□□□□ -0.43
COL8A1-201ENST00000261037 SARSP49591 514 aaKnown RBP12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms