RNA–Protein interactions for RNA: ENST00000260197.11

SORL1-201, Transcript of sortilin related receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORL1, Length 10,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-201ENST00000260197 CHST12Q9NRB3 414 aa11.96□□□□□ -0.5
SORL1-201ENST00000260197 DOCK5Q9H7D0 1870 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 STK25O00506 426 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 IRF1P10914 325 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 GRK4P32298 578 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 KPNA1P52294 538 aaPredicted RBP11.95□□□□□ -0.5
SORL1-201ENST00000260197 FRG1Q14331 258 aaKnown RBP11.95□□□□□ -0.5
SORL1-201ENST00000260197 SAMD4BQ5PRF9 694 aaKnown RBP11.95□□□□□ -0.5
SORL1-201ENST00000260197 ENKURQ8TC29 256 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 MED8Q96G25 268 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 C9orf16Q9BUW7 83 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 TARS2Q9BW92 718 aaKnown RBP11.95□□□□□ -0.5
SORL1-201ENST00000260197 ATAD3AQ9NVI7 634 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 COL3A1P02461 1466 aaPredicted RBP11.95□□□□□ -0.5
SORL1-201ENST00000260197 EIF2B2P49770 351 aaKnown RBP11.95□□□□□ -0.5
SORL1-201ENST00000260197 RPS7P62081 194 aaKnown RBP11.95□□□□□ -0.5
SORL1-201ENST00000260197 MAD2L1Q13257 205 aaPredicted RBP11.95□□□□□ -0.5
SORL1-201ENST00000260197 PDPK2PQ6A1A2 396 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 LRRC39Q96DD0 335 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 YIPF2Q9BWQ6 316 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 ELOVL6Q9H5J4 265 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 CNOT7Q9UIV1 285 aaKnown RBP11.95□□□□□ -0.5
SORL1-201ENST00000260197 AP4E1Q9UPM8 1137 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 SLIT3O75094 1523 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 BGNP21810 368 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 TMC5Q6UXY8 1006 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 CEP44Q9C0F1 390 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 UBA2Q9UBT2 640 aaPredicted RBP11.95□□□□□ -0.5
SORL1-201ENST00000260197 PNMA8CA0A1B0GUJ8 204 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 RPS6KA5O75582 802 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 ANXA6P08133 673 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 CYP2C9P11712 490 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 AMHR2Q16671 573 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 AGKQ53H12 422 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 PDZK1Q5T2W1 519 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 SDE2Q6IQ49 451 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 C1orf50Q9BV19 199 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 MYRFQ9Y2G1 1151 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 C1orf167Q5SNV9 1468 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.95□□□□□ -0.5
SORL1-201ENST00000260197 RAG1P15918 1043 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 ZNF177Q13360 481 aaPredicted RBP11.95□□□□□ -0.5
SORL1-201ENST00000260197 Q4G0T1 1027 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 WDR49Q8IV35 697 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 BTBD7Q9P203 1132 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 MYLKQ15746 1914 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 ARHGAP23Q9P227 1491 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 FAM220BPB1ANY3 271 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 GLP2RO95838 553 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 SERPINE1P05121 402 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 GLI1P08151 1106 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 PRKAA1Q13131 559 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 NFIXQ14938 502 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 FAM172AQ8WUF8 416 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 SMAD5Q99717 465 aaKnown RBP11.95□□□□□ -0.5
SORL1-201ENST00000260197 BTBD10Q9BSF8 475 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 TBC1D13Q9NVG8 400 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 PIPSLA2A3N6 862 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 UBDO15205 165 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 CACNA2D1P54289 1103 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 M0QYT0 321 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 CRABP2P29373 138 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 MAGEA10P43363 369 aaPredicted RBP11.95□□□□□ -0.5
SORL1-201ENST00000260197 NME5P56597 212 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 CDC42EP5Q6NZY7 148 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 TRIM63Q969Q1 353 aa11.95□□□□□ -0.5
SORL1-201ENST00000260197 ACSF2Q96CM8 615 aaPredicted RBP11.95□□□□□ -0.5
SORL1-201ENST00000260197 UTP6Q9NYH9 597 aaKnown RBP11.95□□□□□ -0.5
SORL1-201ENST00000260197 HMBSP08397 361 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 FDPSP14324 419 aaKnown RBP11.94□□□□□ -0.5
SORL1-201ENST00000260197 ALDH7A1P49419 539 aaKnown RBP11.94□□□□□ -0.5
SORL1-201ENST00000260197 MGAT5Q09328 741 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 XRCC4Q13426 336 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 N4BP2L1Q5TBK1 243 aaPredicted RBP11.94□□□□□ -0.5
SORL1-201ENST00000260197 KPNA4O00629 521 aaPredicted RBP11.94□□□□□ -0.5
SORL1-201ENST00000260197 MYL12AP19105 171 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 LRRC71Q8N4P6 559 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 ZCCHC9Q8N567 271 aaKnown RBP11.94□□□□□ -0.5
SORL1-201ENST00000260197 KLHL3Q9UH77 587 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 CTSHP09668 335 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 PIK3R1P27986 724 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 FEN1P39748 380 aaKnown RBP11.94□□□□□ -0.5
SORL1-201ENST00000260197 CCT8P50990 548 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 ITGA1P56199 1179 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 VAC14Q08AM6 782 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 ITGA9Q13797 1035 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 UBXN6Q9BZV1 441 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 TMEM39BQ9GZU3 492 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 HDHD2Q9H0R4 259 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 MIEF1Q9NQG6 463 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 CNGB3Q9NQW8 809 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 KATNA1O75449 491 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 CYP2F1P24903 491 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 FASP25445 335 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 CCNG2Q16589 344 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 ATG16L2Q8NAA4 619 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 REPS1Q96D71 796 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 DMAP1Q9NPF5 467 aaPredicted RBP11.94□□□□□ -0.5
SORL1-201ENST00000260197 DOLKQ9UPQ8 538 aa11.94□□□□□ -0.5
SORL1-201ENST00000260197 DNAJC16Q9Y2G8 782 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms