RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 MFAP3P55082 362 aa19.9■□□□□ 0.78
TM6SF1-201ENST00000258909 STX17P56962 302 aa19.9■□□□□ 0.78
TM6SF1-201ENST00000258909 RPL6Q02878 288 aaKnown RBP19.9■□□□□ 0.78
TM6SF1-201ENST00000258909 TTI2Q6NXR4 508 aa19.9■□□□□ 0.78
TM6SF1-201ENST00000258909 FMNL3Q8IVF7 1028 aa19.9■□□□□ 0.78
TM6SF1-201ENST00000258909 PPM1KQ8N3J5 372 aa19.9■□□□□ 0.78
TM6SF1-201ENST00000258909 NT5C1BQ96P26 610 aa19.9■□□□□ 0.78
TM6SF1-201ENST00000258909 CYP8B1Q9UNU6 501 aa19.9■□□□□ 0.78
TM6SF1-201ENST00000258909 CTNND2Q9UQB3 1225 aa19.9■□□□□ 0.78
TM6SF1-201ENST00000258909 MAP1BP46821 2468 aaKnown RBP19.9■□□□□ 0.78
TM6SF1-201ENST00000258909 ZBTB24O43167 697 aaPredicted RBP19.89■□□□□ 0.77
TM6SF1-201ENST00000258909 KCNK5O95279 499 aa19.89■□□□□ 0.77
TM6SF1-201ENST00000258909 TRIM61Q5EBN2 209 aa19.89■□□□□ 0.77
TM6SF1-201ENST00000258909 BSPRYQ5W0U4 402 aa19.89■□□□□ 0.77
TM6SF1-201ENST00000258909 LYSMD4Q5XG99 296 aa19.89■□□□□ 0.77
TM6SF1-201ENST00000258909 RRAGAQ7L523 313 aa19.89■□□□□ 0.77
TM6SF1-201ENST00000258909 SIX6OS1Q8N1H7 587 aa19.89■□□□□ 0.77
TM6SF1-201ENST00000258909 ZSWIM1Q9BR11 485 aa19.89■□□□□ 0.77
TM6SF1-201ENST00000258909 TMEM9BQ9NQ34 198 aa19.89■□□□□ 0.77
TM6SF1-201ENST00000258909 STON1Q9Y6Q2 735 aa19.89■□□□□ 0.77
TM6SF1-201ENST00000258909 CEP295Q9C0D2 2601 aa19.89■□□□□ 0.77
TM6SF1-201ENST00000258909 ADAMTS9Q9P2N4 1935 aa19.88■□□□□ 0.77
TM6SF1-201ENST00000258909 CDX4O14627 284 aaPredicted RBP19.88■□□□□ 0.77
TM6SF1-201ENST00000258909 TSPAN3O60637 253 aa19.88■□□□□ 0.77
TM6SF1-201ENST00000258909 GABBR2O75899 941 aa19.88■□□□□ 0.77
TM6SF1-201ENST00000258909 BRD2P25440 801 aaKnown RBP19.88■□□□□ 0.77
TM6SF1-201ENST00000258909 PKDCCQ504Y2 493 aa19.88■□□□□ 0.77
TM6SF1-201ENST00000258909 PSAPL1Q6NUJ1 521 aa19.88■□□□□ 0.77
TM6SF1-201ENST00000258909 SYT12Q8IV01 421 aa19.88■□□□□ 0.77
TM6SF1-201ENST00000258909 ELOA2Q8IYF1 753 aaPredicted RBP19.88■□□□□ 0.77
TM6SF1-201ENST00000258909 LMO3Q8TAP4 145 aa19.88■□□□□ 0.77
TM6SF1-201ENST00000258909 DDI1Q8WTU0 396 aa19.88■□□□□ 0.77
TM6SF1-201ENST00000258909 RNF139Q8WU17 664 aa19.88■□□□□ 0.77
TM6SF1-201ENST00000258909 PLD4Q96BZ4 506 aa19.88■□□□□ 0.77
TM6SF1-201ENST00000258909 FSCN3Q9NQT6 498 aa19.88■□□□□ 0.77
TM6SF1-201ENST00000258909 SLC27A6Q9Y2P4 619 aa19.88■□□□□ 0.77
TM6SF1-201ENST00000258909 ASCC3Q8N3C0 2202 aaKnown RBP19.88■□□□□ 0.77
TM6SF1-201ENST00000258909 CACNA1BQ00975 2339 aa19.88■□□□□ 0.77
TM6SF1-201ENST00000258909 IGHV1OR15-9A0A0B4J2B8 117 aa19.87■□□□□ 0.77
TM6SF1-201ENST00000258909 GIPC1O14908 333 aa19.87■□□□□ 0.77
TM6SF1-201ENST00000258909 AP5Z1O43299 807 aa19.87■□□□□ 0.77
TM6SF1-201ENST00000258909 MSI1O43347 362 aaKnown RBP19.87■□□□□ 0.77
TM6SF1-201ENST00000258909 CYBBP04839 570 aa19.87■□□□□ 0.77
TM6SF1-201ENST00000258909 SETSIPP0DME0 302 aa19.87■□□□□ 0.77
TM6SF1-201ENST00000258909 MAPK8P45983 427 aa19.87■□□□□ 0.77
TM6SF1-201ENST00000258909 MORC3Q14149 939 aa19.87■□□□□ 0.77
TM6SF1-201ENST00000258909 TRIP4Q15650 581 aaPredicted RBP19.87■□□□□ 0.77
TM6SF1-201ENST00000258909 UAP1L1Q3KQV9 507 aa19.87■□□□□ 0.77
TM6SF1-201ENST00000258909 DAB2IPQ5VWQ8 1189 aa19.87■□□□□ 0.77
TM6SF1-201ENST00000258909 PMF1Q6P1K2 205 aa19.87■□□□□ 0.77
TM6SF1-201ENST00000258909 LCLAT1Q6UWP7 414 aa19.87■□□□□ 0.77
TM6SF1-201ENST00000258909 KIAA1324Q6UXG2 1013 aaKnown RBP19.87■□□□□ 0.77
TM6SF1-201ENST00000258909 ARHGEF19Q8IW93 802 aa19.87■□□□□ 0.77
TM6SF1-201ENST00000258909 KCTD13Q8WZ19 329 aa19.87■□□□□ 0.77
TM6SF1-201ENST00000258909 MRGPRX1Q96LB2 322 aa19.87■□□□□ 0.77
TM6SF1-201ENST00000258909 KIAA1257Q9ULG3 409 aa19.87■□□□□ 0.77
TM6SF1-201ENST00000258909 PAEPP09466 180 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 PPP1R2P41236 205 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 IL12RB1P42701 662 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 NOVA1P51513 510 aaKnown RBP19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 SLC36A4Q6YBV0 504 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 CPXM2Q8N436 756 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 SORCS1Q8WY21 1168 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 PIWIL1Q96J94 861 aaKnown RBP19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 NUSAP1Q9BXS6 441 aaKnown RBP19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 OLA1Q9NTK5 396 aaKnown RBP19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 PILRBQ9UKJ0 227 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 M0QYV0 167 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 GFRA2O00451 464 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 PMM2O15305 246 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 CFIP05156 583 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 HARS2P49590 506 aaKnown RBP19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 DAOAP59103 153 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 ZNF33AQ06730 810 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 CETN1Q12798 172 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 FUT11Q495W5 492 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 SPDYCQ5MJ68 293 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 ANKS1BQ7Z6G8 1248 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 SLC41A1Q8IVJ1 513 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 RBBP8NLQ8NC74 664 aaPredicted RBP19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 CLEC4CQ8WTT0 213 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 SLC35F5Q8WV83 523 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 CIPCQ9C0C6 399 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 CNGB3Q9NQW8 809 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 ABCC13Q9NSE7 274 aa19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 THAP10Q9P2Z0 257 aaPredicted RBP19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 EVLQ9UI08 416 aaPredicted RBP19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 HBS1LQ9Y450 684 aaKnown RBP19.86■□□□□ 0.77
TM6SF1-201ENST00000258909 BICDL2A1A5D9 508 aa19.85■□□□□ 0.77
TM6SF1-201ENST00000258909 ZNF217O75362 1048 aa19.85■□□□□ 0.77
TM6SF1-201ENST00000258909 ENGP17813 658 aa19.85■□□□□ 0.77
TM6SF1-201ENST00000258909 KCNH2Q12809 1159 aa19.85■□□□□ 0.77
TM6SF1-201ENST00000258909 STARD3Q14849 445 aa19.85■□□□□ 0.77
TM6SF1-201ENST00000258909 CNGA2Q16280 664 aa19.85■□□□□ 0.77
TM6SF1-201ENST00000258909 SH3PXD2AQ5TCZ1 1133 aa19.85■□□□□ 0.77
TM6SF1-201ENST00000258909 TMEM215Q68D42 235 aa19.85■□□□□ 0.77
TM6SF1-201ENST00000258909 TRIM59Q8IWR1 403 aa19.85■□□□□ 0.77
TM6SF1-201ENST00000258909 FAM217AQ8IXS0 508 aa19.85■□□□□ 0.77
TM6SF1-201ENST00000258909 EHBP1Q8NDI1 1231 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms