RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 TAF12Q16514 161 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 OTOP3Q7RTS5 596 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 RSPH3Q86UC2 560 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 VPS52Q8N1B4 723 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 ANKS4BQ8N8V4 417 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 ATP11CQ8NB49 1132 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 MCUQ8NE86 351 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 MYLPFQ96A32 169 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 ANLNQ9NQW6 1124 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 ACTL7AQ9Y615 435 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 CFAP69A5D8W1 941 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 SLC15A5A6NIM6 579 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 DNM1LO00429 736 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 CDH16O75309 829 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 PRKCGP05129 697 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 FOXN2P32314 431 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 BCAT1P54687 386 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 CLDN10P78369 228 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 MXRA7P84157 204 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 OLFML1Q6UWY5 402 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 AGMOQ6ZNB7 445 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 EXOC8Q8IYI6 725 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 TNS4Q8IZW8 715 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 ERP27Q96DN0 273 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 RMDN2Q96LZ7 410 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 RLFQ13129 1914 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 A0A087WUV0 522 aaPredicted RBP9.41□□□□□ -0.9
CKAP2-201ENST00000258607 RNF103O00237 685 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 TRAPPC3O43617 180 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 B4GALT3O60512 393 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 LPXNO60711 386 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 TADA2AO75478 443 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 LSM8O95777 96 aaKnown RBP9.41□□□□□ -0.9
CKAP2-201ENST00000258607 GPX6P59796 221 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 MRPS6P82932 125 aaKnown RBP9.41□□□□□ -0.9
CKAP2-201ENST00000258607 FAM171A1Q5VUB5 890 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 LCLAT1Q6UWP7 414 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 RAPH1Q70E73 1250 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 PCGF5Q86SE9 256 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 COLGALT1Q8NBJ5 622 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 TNIP3Q96KP6 325 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 GLT1D1Q96MS3 346 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 BCO2Q9BYV7 579 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 SENP6Q9GZR1 1112 aaPredicted RBP9.41□□□□□ -0.9
CKAP2-201ENST00000258607 WDCPQ9H6R7 721 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 NRDE2Q9H7Z3 1164 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 RSAD1Q9HA92 442 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 GNEQ9Y223 722 aaKnown RBP9.41□□□□□ -0.9
CKAP2-201ENST00000258607 TRIM17Q9Y577 477 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 BRCA1P38398 1863 aaKnown RBP9.4□□□□□ -0.9
CKAP2-201ENST00000258607 TCRBV9S1A1TA0A576 114 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 CHRNA4P43681 627 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 EIF3BP55884 814 aaKnown RBP9.4□□□□□ -0.9
CKAP2-201ENST00000258607 ITGA7Q13683 1181 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 ZNF460Q14592 562 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 OVOS1Q6IE37 1185 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 VSTM1Q6UX27 236 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 CLEC20AQ6ZU45 233 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 TADA2BQ86TJ2 420 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 LRRTM3Q86VH5 581 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 PPIL6Q8IXY8 311 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 SNX31Q8N9S9 440 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 ZNF669Q96BR6 464 aaPredicted RBP9.4□□□□□ -0.9
CKAP2-201ENST00000258607 ZNF560Q96MR9 790 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 CSPG4P5Q96PW8 444 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 SUDS3Q9H7L9 328 aaPredicted RBP9.4□□□□□ -0.9
CKAP2-201ENST00000258607 PLEKHA5Q9HAU0 1116 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 FBXO6Q9NRD1 293 aaPredicted RBP9.4□□□□□ -0.9
CKAP2-201ENST00000258607 WHRNQ9P202 907 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 NEMP1O14524 444 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 GJB3O75712 270 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 NPR3P17342 541 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 ERCC2P18074 760 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 TSPAN8P19075 237 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 ZNF268Q14587 947 aaPredicted RBP9.4□□□□□ -0.9
CKAP2-201ENST00000258607 DCAF4L1Q3SXM0 396 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 SV2CQ496J9 727 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 EFHC2Q5JST6 749 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 CERCAMQ5T4B2 595 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 NDUFAF2Q8N183 169 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 PQLC3Q8N755 202 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 RNF139Q8WU17 664 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 SEC14L1Q92503 715 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 ZNF778Q96MU6 729 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 SERPINB12Q96P63 405 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 APBA2Q99767 749 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 KLC2Q9H0B6 622 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 DDX56Q9NY93 547 aaKnown RBP9.4□□□□□ -0.9
CKAP2-201ENST00000258607 PLK2Q9NYY3 685 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 HAO1Q9UJM8 370 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 C2CD2Q9Y426 696 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 L3MBTL1Q9Y468 752 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 RPS6KL1Q9Y6S9 549 aa9.4□□□□□ -0.9
CKAP2-201ENST00000258607 CLUHO75153 1309 aa9.4□□□□□ -0.91
CKAP2-201ENST00000258607 GNAT1P11488 350 aa9.4□□□□□ -0.91
CKAP2-201ENST00000258607 KLRC2P26717 231 aa9.4□□□□□ -0.91
CKAP2-201ENST00000258607 FCGRTP55899 365 aa9.4□□□□□ -0.91
CKAP2-201ENST00000258607 WDR4P57081 412 aaKnown RBP9.4□□□□□ -0.91
CKAP2-201ENST00000258607 RPL10AP62906 217 aaKnown RBP9.4□□□□□ -0.91
CKAP2-201ENST00000258607 KCNJ2P63252 427 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms