RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 GLP2RO95838 553 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 CHRM3P20309 590 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 ARL2P36404 184 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 NNTQ13423 1086 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 WSCD1Q658N2 575 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 GRAMD1AQ96CP6 724 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 BBS2Q9BXC9 721 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 DUSP16Q9BY84 665 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 TRIM55Q9BYV6 548 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 HPSEQ9Y251 543 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 PCDHA11Q9Y5I1 949 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 IRAK2O43187 625 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 KLHL41O60662 606 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 PCSK2P16519 638 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 CASP2P42575 452 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 RANBP1P43487 201 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 WDR45BQ5MNZ6 344 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 C3orf20Q8ND61 904 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 SFXN1Q9H9B4 322 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 C20orf96Q9NUD7 363 aaPredicted RBP13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 TXLNGQ9NUQ3 528 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 CST8O60676 142 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 RBP3P10745 1247 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 CNTN1Q12860 1018 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 GRIK5Q16478 980 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 INTS6LQ5JSJ4 861 aaKnown RBP13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 SCARA3Q6AZY7 606 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 ECHDC2Q86YB7 292 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 PSTKQ8IV42 348 aaKnown RBP13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 PPM1NQ8N819 430 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 GBP7Q8N8V2 638 aaPredicted RBP13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 USP33Q8TEY7 942 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 STAMBPL1Q96FJ0 436 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 BCO2Q9BYV7 579 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 COG4Q9H9E3 785 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 POLD4Q9HCU8 107 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 ZNF214Q9UL59 606 aaPredicted RBP13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 PACSIN2Q9UNF0 486 aaPredicted RBP13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 SLC27A6Q9Y2P4 619 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 A0A1B0GUA9 196 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 RBM47A0AV96 593 aaKnown RBP13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 CNPP09543 421 aaKnown RBP13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 NR1I3Q14994 352 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 AMHR2Q16671 573 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 RRM2BQ7LG56 351 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 CELF5Q8N6W0 485 aaKnown RBP13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 IRF7Q92985 503 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 HSD17B14Q9BPX1 270 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 FBRSQ9HAH7 460 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 IRS2Q9Y4H2 1338 aa13.81□□□□□ -0.2
PRPF38A-201ENST00000257181 ATP2C2O75185 946 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 FTH1P02794 183 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 RBP1P09455 135 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 WARSP23381 471 aaKnown RBP13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 PMS2P54278 862 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 CDR2LQ86X02 465 aaPredicted RBP13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 RXFP2Q8WXD0 754 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 PHPT1Q9NRX4 125 aaPredicted RBP13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 SUSD2Q9UGT4 822 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 XPO7Q9UIA9 1087 aaKnown RBP13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 ARHGAP26Q9UNA1 814 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 FZD1Q9UP38 647 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 ALOX15P16050 662 aaPredicted RBP13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 PLOD1Q02809 727 aaPredicted RBP13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 USP10Q14694 798 aaKnown RBP13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 CLEC4DQ8WXI8 215 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 DUS2Q9NX74 493 aaKnown RBP13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 WWOXQ9NZC7 414 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 APPL1Q9UKG1 709 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 SDR42E2A6NKP2 422 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 KPNA3O00505 521 aaPredicted RBP13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 CDH17Q12864 832 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 KRT72Q14CN4 511 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 TRIP13Q15645 432 aaPredicted RBP13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 CYP2A13Q16696 494 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 PAGE2BQ5JRK9 111 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 LRRC38Q5VT99 294 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 NT5DC3Q86UY8 548 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 C7orf57Q8NEG2 295 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 PNMA5Q96PV4 448 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 C8orf33Q9H7E9 229 aaPredicted RBP13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 RCOR3Q9P2K3 495 aaPredicted RBP13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 FAM153AQ9UHL3 310 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 GRIN2DO15399 1336 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 ZNF500O60304 480 aaPredicted RBP13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 ANGPTL8Q6UXH0 198 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 TAS1R2Q8TE23 839 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 NELL2Q99435 816 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 ABCB6Q9NP58 842 aa13.8□□□□□ -0.2
PRPF38A-201ENST00000257181 FGFR4P22455 802 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 MORF4L2Q15014 288 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 MYRIPQ8NFW9 859 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 TTC17Q96AE7 1141 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 BTN2A3PQ96KV6 586 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 DHX33Q9H6R0 707 aaKnown RBP13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 TMPRSS15P98073 1019 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 SLC12A1Q13621 1099 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 RARS2Q5T160 578 aaKnown RBP13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 ZBED8Q8IZ13 594 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 MGARPQ8TDB4 240 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms