RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.95□□□□□ -0.18
VHL-201ENST00000256474 NIPA2Q8N8Q9 360 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 MZB1Q8WU39 189 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 AFG1LQ8WV93 481 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 XAB2Q9HCS7 855 aaKnown RBP13.95□□□□□ -0.18
VHL-201ENST00000256474 BARX2Q9UMQ3 279 aaPredicted RBP13.95□□□□□ -0.18
VHL-201ENST00000256474 SLC15A5A6NIM6 579 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 TPP1O14773 563 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 ATG7O95352 703 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 TPH1P17752 444 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 MBTD1Q05BQ5 628 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 CUL3Q13618 768 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 ITGA9Q13797 1035 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 KCNJ11Q14654 390 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 FAM47CQ5HY64 1035 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 TTC30AQ86WT1 665 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 WDR75Q8IWA0 830 aaKnown RBP13.95□□□□□ -0.18
VHL-201ENST00000256474 CCDC185Q8N715 623 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 PQLC3Q8N755 202 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 PPP4R1Q8TF05 950 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 PHACTR1Q9C0D0 580 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 VCXQ9H320 206 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 CAB39LQ9H9S4 337 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 USP29Q9HBJ7 922 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 POPDC2Q9HBU9 364 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 PSAT1Q9Y617 370 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 COL2A1P02458 1487 aaPredicted RBP13.95□□□□□ -0.18
VHL-201ENST00000256474 KIAA1217Q5T5P2 1943 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 RBP5P82980 135 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 SLC10A2Q12908 348 aaPredicted RBP13.95□□□□□ -0.18
VHL-201ENST00000256474 LBX2Q6XYB7 198 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 NRDE2Q9H7Z3 1164 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 CYLDQ9NQC7 956 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 TUBGCP4Q9UGJ1 667 aa13.95□□□□□ -0.18
VHL-201ENST00000256474 APOBEC2Q9Y235 224 aaKnown RBP13.95□□□□□ -0.18
VHL-201ENST00000256474 CCDC160A6NGH7 325 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 B4GALT4O60513 344 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 PROCP04070 461 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 CYP2C8P10632 490 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 ARL4AP40617 200 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 GLRBP48167 497 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 GRAMD1BQ3KR37 738 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 CATSPER4Q7RTX7 472 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 ZNF276Q8N554 614 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 USP33Q8TEY7 942 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 GBP5Q96PP8 586 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 LHX5Q9H2C1 402 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 SPATS2LQ9NUQ6 558 aaKnown RBP13.94□□□□□ -0.18
VHL-201ENST00000256474 NDE1Q9NXR1 346 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 PAPSS1O43252 624 aaPredicted RBP13.94□□□□□ -0.18
VHL-201ENST00000256474 ETV4P43268 484 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 PITX1P78337 314 aaPredicted RBP13.94□□□□□ -0.18
VHL-201ENST00000256474 CELF3Q5SZQ8 465 aaKnown RBP13.94□□□□□ -0.18
VHL-201ENST00000256474 ZNF618Q5T7W0 954 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 TSHZ1Q6ZSZ6 1077 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 RAPH1Q70E73 1250 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 ILDR2Q71H61 639 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 COLGALT1Q8NBJ5 622 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 SKA1Q96BD8 255 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 PTCD3Q96EY7 689 aaKnown RBP13.94□□□□□ -0.18
VHL-201ENST00000256474 SMARCAD1Q9H4L7 1026 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 CACNA2D1P54289 1103 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 BOLA3Q53S33 107 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 LPCAT4Q643R3 524 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 ZNF772Q68DY9 489 aaPredicted RBP13.94□□□□□ -0.18
VHL-201ENST00000256474 RASSF3Q86WH2 238 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 ATP2A3Q93084 1043 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 MCRS1Q96EZ8 462 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 KLHL8Q9P2G9 620 aaPredicted RBP13.94□□□□□ -0.18
VHL-201ENST00000256474 RPS6KL1Q9Y6S9 549 aa13.94□□□□□ -0.18
VHL-201ENST00000256474 RBBP6Q7Z6E9 1792 aaKnown RBP13.94□□□□□ -0.18
VHL-201ENST00000256474 CLDN5O00501 218 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 RFPL1O75677 317 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 TCN1P20061 433 aaPredicted RBP13.93□□□□□ -0.18
VHL-201ENST00000256474 AVPR1AP37288 418 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 DLG2Q15700 870 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 C10orf107Q8IVU9 208 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 ULK2Q8IYT8 1036 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 MED10Q9BTT4 135 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 PPM1HQ9ULR3 514 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 E7ESA3 106 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 DCXO43602 365 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 LMNAP02545 664 aaKnown RBP13.93□□□□□ -0.18
VHL-201ENST00000256474 LMO2P25791 158 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 RABGAP1LQ5R372 815 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 SDCCAG8Q86SQ7 713 aaPredicted RBP13.93□□□□□ -0.18
VHL-201ENST00000256474 GSDMBQ8TAX9 411 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 SH3TC2Q8TF17 1288 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 ZNF333Q96JL9 665 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 MARK4Q96L34 752 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 PPCSQ9HAB8 311 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 PRMT7Q9NVM4 692 aaPredicted RBP13.93□□□□□ -0.18
VHL-201ENST00000256474 AK5Q9Y6K8 562 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 ZBTB42B2RXF5 422 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 AIM2O14862 343 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 CHADO15335 359 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 WFS1O76024 890 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 DDNO94850 711 aaPredicted RBP13.93□□□□□ -0.18
VHL-201ENST00000256474 IL18RAPO95256 599 aa13.93□□□□□ -0.18
VHL-201ENST00000256474 ETS2P15036 469 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 305 ms