RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 STMN3Q9NZ72 180 aa12.21□□□□□ -0.45
CCNA1-201ENST00000255465 SUCOQ9UBS9 1254 aaKnown RBP12.21□□□□□ -0.45
CCNA1-201ENST00000255465 MAFFQ9ULX9 164 aa12.21□□□□□ -0.45
CCNA1-201ENST00000255465 PLA2G4CQ9UP65 541 aa12.21□□□□□ -0.45
CCNA1-201ENST00000255465 SEPT4O43236 478 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 ZNF254O75437 659 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 JRKO75564 520 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 POLR2MP0CAP2 368 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 RNASE9P60153 205 aaKnown RBP12.21□□□□□ -0.46
CCNA1-201ENST00000255465 CAV1Q03135 178 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 KCNA1Q09470 495 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 PDE1CQ14123 709 aaPredicted RBP12.21□□□□□ -0.46
CCNA1-201ENST00000255465 STAT4Q14765 748 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 STILQ15468 1287 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 PCSK7Q16549 785 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 TJAP1Q5JTD0 557 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 C1orf146Q5VVC0 180 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 LHX8Q68G74 356 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 SCARA3Q6AZY7 606 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 EEPD1Q7L9B9 569 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 GPR180Q86V85 440 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 BRSK1Q8TDC3 778 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 P2RX5Q93086 422 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 THAP11Q96EK4 314 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 NLRP4Q96MN2 994 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 TRIM51Q9BSJ1 452 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 RNF26Q9BY78 433 aaPredicted RBP12.21□□□□□ -0.46
CCNA1-201ENST00000255465 CCSER1Q9C0I3 900 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 KATNBL1Q9H079 304 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 KLHL25Q9H0H3 589 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 ABHD16BQ9H3Z7 469 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 TMEM9Q9P0T7 183 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 VANGL2Q9ULK5 521 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 PPM1HQ9ULR3 514 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 POLIQ9UNA4 740 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 DTNAQ9Y4J8 743 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 PCDHB6Q9Y5E3 794 aa12.21□□□□□ -0.46
CCNA1-201ENST00000255465 RNF103O00237 685 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 TXNDC9O14530 226 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 FOXD2O60548 495 aaPredicted RBP12.2□□□□□ -0.46
CCNA1-201ENST00000255465 SRGAP2CP0DJJ0 459 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 TGFB3P10600 412 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 CCDC130P13994 396 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 PON1P27169 355 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 SLCO1A2P46721 670 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 SLC5A3P53794 718 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 ESRRGP62508 458 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 IFITM2Q01629 132 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 RAPGEF1Q13905 1077 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 TLR1Q15399 786 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 PFKFB3Q16875 520 aaPredicted RBP12.2□□□□□ -0.46
CCNA1-201ENST00000255465 FBXL19Q6PCT2 694 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 USP49Q70CQ1 688 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 ULK2Q8IYT8 1036 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 SLC38A6Q8IZM9 456 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 MAML1Q92585 1016 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 SHISA4Q96DD7 197 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 ZNF486Q96H40 463 aaPredicted RBP12.2□□□□□ -0.46
CCNA1-201ENST00000255465 RMDN3Q96TC7 470 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 DOK1Q99704 481 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 SLC26A6Q9BXS9 759 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 CRISPLD2Q9H0B8 497 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 CDH19Q9H159 772 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 GLT8D2Q9H1C3 349 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 RMND5AQ9H871 391 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 TNFRSF10DQ9UBN6 386 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 AP4S1Q9Y587 144 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 PCDHGB3Q9Y5G1 929 aa12.2□□□□□ -0.46
CCNA1-201ENST00000255465 TEX51A0A1B0GUA7 166 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 ARHGEF35A5YM69 484 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 hCG_1984214I3L0E3 225 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 MEIS2O14770 477 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 MSCO60682 206 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 DNAJA2O60884 412 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 GH1P01241 217 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 RBP3P10745 1247 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 CFL1P23528 166 aaKnown RBP12.19□□□□□ -0.46
CCNA1-201ENST00000255465 EDNRBP24530 442 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 NAPAP54920 295 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 WDR4P57081 412 aaKnown RBP12.19□□□□□ -0.46
CCNA1-201ENST00000255465 TDRD12Q587J7 1177 aaKnown RBP12.19□□□□□ -0.46
CCNA1-201ENST00000255465 TRIML2Q8N7C3 387 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 ANKRD53Q8N9V6 530 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 TBC1D15Q8TC07 691 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 NSUN6Q8TEA1 469 aaKnown RBP12.19□□□□□ -0.46
CCNA1-201ENST00000255465 CHAC2Q8WUX2 184 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 CNDP2Q96KP4 475 aaKnown RBP12.19□□□□□ -0.46
CCNA1-201ENST00000255465 INO80BQ9C086 356 aaPredicted RBP12.19□□□□□ -0.46
CCNA1-201ENST00000255465 ARMC7Q9H6L4 198 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 SIAEQ9HAT2 523 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 FANCEQ9HB96 536 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 IFT122Q9HBG6 1241 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 BARHL2Q9NY43 387 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 WHRNQ9P202 907 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 HMGXB4Q9UGU5 601 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 CNOT11Q9UKZ1 510 aaKnown RBP12.19□□□□□ -0.46
CCNA1-201ENST00000255465 TMCC3Q9ULS5 477 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 SPEF1Q9Y4P9 236 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 ZSCAN5BA6NJL1 495 aa12.19□□□□□ -0.46
CCNA1-201ENST00000255465 ZNF839A8K0R7 811 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms