RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 JAMLQ86YT9 394 aa9.82□□□□□ -0.84
NIP7-202ENST00000254941 RFX6Q8HWS3 928 aa9.82□□□□□ -0.84
NIP7-202ENST00000254941 TCEAL8Q8IYN2 117 aa9.82□□□□□ -0.84
NIP7-202ENST00000254941 ATL2Q8NHH9 583 aa9.82□□□□□ -0.84
NIP7-202ENST00000254941 GIPC2Q8TF65 315 aa9.82□□□□□ -0.84
NIP7-202ENST00000254941 RNF139Q8WU17 664 aa9.82□□□□□ -0.84
NIP7-202ENST00000254941 HNRNPLLQ8WVV9 542 aaKnown RBP9.82□□□□□ -0.84
NIP7-202ENST00000254941 CASP10Q92851 521 aa9.82□□□□□ -0.84
NIP7-202ENST00000254941 MYRFLQ96LU7 910 aa9.82□□□□□ -0.84
NIP7-202ENST00000254941 KCTD15Q96SI1 283 aaPredicted RBP9.82□□□□□ -0.84
NIP7-202ENST00000254941 ERP44Q9BS26 406 aa9.82□□□□□ -0.84
NIP7-202ENST00000254941 FRMD8P1Q9BZ68 369 aaPredicted RBP9.82□□□□□ -0.84
NIP7-202ENST00000254941 MAGEB5Q9BZ81 275 aa9.82□□□□□ -0.84
NIP7-202ENST00000254941 UBE2OQ9C0C9 1292 aaKnown RBP9.82□□□□□ -0.84
NIP7-202ENST00000254941 RAB17Q9H0T7 212 aa9.82□□□□□ -0.84
NIP7-202ENST00000254941 PLEKHA4Q9H4M7 779 aa9.82□□□□□ -0.84
NIP7-202ENST00000254941 CYP4F11Q9HBI6 524 aa9.82□□□□□ -0.84
NIP7-202ENST00000254941 EPB41L5Q9HCM4 733 aa9.82□□□□□ -0.84
NIP7-202ENST00000254941 ANLNQ9NQW6 1124 aa9.82□□□□□ -0.84
NIP7-202ENST00000254941 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.82□□□□□ -0.84
NIP7-202ENST00000254941 UTP11Q9Y3A2 253 aaKnown RBP9.82□□□□□ -0.84
NIP7-202ENST00000254941 C5orf67F2Z3F1 127 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 I6L893 689 aaPredicted RBP9.81□□□□□ -0.84
NIP7-202ENST00000254941 LIASO43766 372 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 CXCL14O95715 111 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 CSH1P0DML2 217 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 CSH2P0DML3 217 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 ALDH1A3P47895 512 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 DYNLT1P63172 113 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 BYSLQ13895 437 aaKnown RBP9.81□□□□□ -0.84
NIP7-202ENST00000254941 OASLQ15646 514 aaKnown RBP9.81□□□□□ -0.84
NIP7-202ENST00000254941 C9orf50Q5SZB4 431 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 TMC7Q7Z402 723 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 PYROXD2Q8N2H3 581 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 ZNF276Q8N554 614 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 PQLC3Q8N755 202 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 EIF1ADQ8N9N8 165 aaKnown RBP9.81□□□□□ -0.84
NIP7-202ENST00000254941 PCDH19Q8TAB3 1148 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 SLC35B2Q8TB61 432 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 ACTL9Q8TC94 416 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 GRK7Q8WTQ7 553 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 OVCA2Q8WZ82 227 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 NKD2Q969F2 451 aaPredicted RBP9.81□□□□□ -0.84
NIP7-202ENST00000254941 SERPINB11Q96P15 392 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 CSPG4P5Q96PW8 444 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 FAM118BQ9BPY3 351 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 TMPRSS4Q9NRS4 437 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 OLA1Q9NTK5 396 aaKnown RBP9.81□□□□□ -0.84
NIP7-202ENST00000254941 CWC15Q9P013 229 aaKnown RBP9.81□□□□□ -0.84
NIP7-202ENST00000254941 SAE1Q9UBE0 346 aaPredicted RBP9.81□□□□□ -0.84
NIP7-202ENST00000254941 SFMBT1Q9UHJ3 866 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 RASAL2Q9UJF2 1139 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 DNPEPQ9ULA0 475 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 DRG1Q9Y295 367 aaKnown RBP9.81□□□□□ -0.84
NIP7-202ENST00000254941 YIPF1Q9Y548 306 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 NR2E3Q9Y5X4 410 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 MYO18AQ92614 2054 aaKnown RBP9.81□□□□□ -0.84
NIP7-202ENST00000254941 PRRG1O14668 218 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 ERLIN1O75477 346 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 ECEL1O95672 775 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 GAS8O95995 478 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 HMGA1P17096 107 aaKnown RBP9.81□□□□□ -0.84
NIP7-202ENST00000254941 GOT1P17174 413 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 TGM2P21980 687 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 CCR1P32246 355 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 ELF1P32519 619 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 ARL4AP40617 200 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 MAGEA10P43363 369 aaPredicted RBP9.81□□□□□ -0.84
NIP7-202ENST00000254941 DRG2P55039 364 aaKnown RBP9.81□□□□□ -0.84
NIP7-202ENST00000254941 VCPP55072 806 aaKnown RBP9.81□□□□□ -0.84
NIP7-202ENST00000254941 ERVFC1P60507 584 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 OTUD4Q01804 1114 aaKnown RBP9.81□□□□□ -0.84
NIP7-202ENST00000254941 LMNB2Q03252 620 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 UBE3AQ05086 875 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 SEMA3BQ13214 749 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 NNTQ13423 1086 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 PPP2R5DQ14738 602 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 BRMS1LQ5PSV4 323 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 SNX30Q5VWJ9 437 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 DUPD1Q68J44 220 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 SYDE1Q6ZW31 735 aaPredicted RBP9.81□□□□□ -0.84
NIP7-202ENST00000254941 PLD5Q8N7P1 536 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 PDZD8Q8NEN9 1154 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 SPPL3Q8TCT6 385 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.81□□□□□ -0.84
NIP7-202ENST00000254941 TRMT2BQ96GJ1 504 aaKnown RBP9.81□□□□□ -0.84
NIP7-202ENST00000254941 TRIM51Q9BSJ1 452 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 TKTL2Q9H0I9 626 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 PRDM16Q9HAZ2 1276 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 ARFGAP3Q9NP61 516 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 ALG13Q9NP73 1137 aaKnown RBP9.81□□□□□ -0.84
NIP7-202ENST00000254941 ARHGEF38Q9NXL2 777 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 NUDT5Q9UKK9 219 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 MAGED2Q9UNF1 606 aaPredicted RBP9.81□□□□□ -0.84
NIP7-202ENST00000254941 TLR6Q9Y2C9 796 aa9.81□□□□□ -0.84
NIP7-202ENST00000254941 SHROOM3Q8TF72 1996 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 TNRC18O15417 2968 aaPredicted RBP9.8□□□□□ -0.84
NIP7-202ENST00000254941 ATG2AQ2TAZ0 1938 aa9.8□□□□□ -0.84
NIP7-202ENST00000254941 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.8□□□□□ -0.84
NIP7-202ENST00000254941 ESYT3A0FGR9 886 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms