RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 C4BPAP04003 597 aaKnown RBP15.44■□□□□ 0.06
UBE4B-201ENST00000253251 YBX3P16989 372 aaKnown RBP eCLIP15.44■□□□□ 0.062e-6■□□□□ 8.5
UBE4B-201ENST00000253251 KLRC2P26717 231 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 PIGZQ86VD9 579 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 TTC30AQ86WT1 665 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 BSNDQ8WZ55 320 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 HES6Q96HZ4 224 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 FICDQ9BVA6 458 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 CNTNAP1P78357 1384 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 F8VP50 259 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 DAB1O75553 588 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 RBP1P09455 135 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 CSH1P0DML2 217 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 CSH2P0DML3 217 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 CHRM3P20309 590 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 LBRQ14739 615 aaKnown RBP15.44■□□□□ 0.06
UBE4B-201ENST00000253251 SPANXN3Q5MJ09 141 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 CD274Q9NZQ7 290 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 MOXD2PA6NHM9 499 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 STMN1P16949 149 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 SUGP1Q8IWZ8 645 aaKnown RBP15.44■□□□□ 0.06
UBE4B-201ENST00000253251 CXorf38Q8TB03 319 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 LRRC19Q9H756 370 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 MRPL17Q9NRX2 175 aaKnown RBP15.44■□□□□ 0.06
UBE4B-201ENST00000253251 C10orf71Q711Q0 1435 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 HEATR9A2RTY3 570 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 TRDMT1O14717 391 aaKnown RBP15.43■□□□□ 0.06
UBE4B-201ENST00000253251 LCA5LO95447 670 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 GRK4P32298 578 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 ATP5C1P36542 298 aaKnown RBP15.43■□□□□ 0.06
UBE4B-201ENST00000253251 AP2B1P63010 937 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 PARP6Q2NL67 630 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 FAM183BPQ6ZVS7 135 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 CMTM5Q96DZ9 223 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 NT5MQ9NPB1 228 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 TAS2R14Q9NYV8 317 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 MARCH2Q9P0N8 246 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 CDYLQ9Y232 598 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 EFR3BQ9Y2G0 817 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 PHF20L1A8MW92 1017 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 RNASEH1O60930 286 aaKnown RBP15.43■□□□□ 0.06
UBE4B-201ENST00000253251 TRUB2O95900 331 aaKnown RBP15.43■□□□□ 0.06
UBE4B-201ENST00000253251 PIGRP01833 764 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 PGAM1P18669 254 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 AMPD1P23109 780 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 GRK2P25098 689 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 MPP3Q13368 585 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 USP41Q3LFD5 358 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 SLC45A4Q5BKX6 768 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 SCARA3Q6AZY7 606 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 LCLAT1Q6UWP7 414 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 BBS12Q6ZW61 710 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 RSPH1Q8WYR4 309 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 SPDL1Q96EA4 605 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 MAGEB18Q96M61 343 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 DUSP16Q9BY84 665 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 ALG13Q9NP73 1137 aaKnown RBP15.43■□□□□ 0.06
UBE4B-201ENST00000253251 THG1LQ9NWX6 298 aaKnown RBP15.43■□□□□ 0.06
UBE4B-201ENST00000253251 CCDC78A2IDD5 438 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 TTLL13PA6NNM8 815 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 SUPT3HB4E1H0 165 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 ANGPT2O15123 496 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 SUPT3HO75486 399 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 USP17L7P0C7H9 530 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 RFC1P35251 1148 aaPredicted RBP15.43■□□□□ 0.06
UBE4B-201ENST00000253251 ZCCHC9Q8N567 271 aaKnown RBP15.43■□□□□ 0.06
UBE4B-201ENST00000253251 SEC16BQ96JE7 1060 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 ASPSCR1Q9BZE9 553 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 PDZD7Q9H5P4 517 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 YY1AP1Q9H869 796 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 HES2Q9Y543 173 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 SMPD1P17405 629 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 MAP2K2P36507 400 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 AARSP49588 968 aaKnown RBP eCLIP15.43■□□□□ 0.06
UBE4B-201ENST00000253251 PRKAA2P54646 552 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 MKRN4PQ13434 485 aaPredicted RBP15.43■□□□□ 0.06
UBE4B-201ENST00000253251 SMAD1Q15797 465 aaKnown RBP15.43■□□□□ 0.06
UBE4B-201ENST00000253251 SMYD5Q6GMV2 418 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 KCNT2Q6UVM3 1135 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 TMC3Q7Z5M5 1100 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 PCYOX1LQ8NBM8 494 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 NCLNQ969V3 563 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 TKTL2Q9H0I9 626 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 PKD2L2Q9NZM6 624 aa15.43■□□□□ 0.06
UBE4B-201ENST00000253251 SLCO1B7G3V0H7 640 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 RIPK2O43353 540 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 SELPP16109 830 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 CAPNS2Q96L46 248 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 NR2E3Q9Y5X4 410 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 NHSL1Q5SYE7 1610 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 MYO1CO00159 1063 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 CHADO15335 359 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 TSPAN1O60635 241 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 LGR5O75473 907 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 SRP72O76094 671 aaKnown RBP15.42■□□□□ 0.06
UBE4B-201ENST00000253251 CKBP12277 381 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 MYL4P12829 197 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 OR1E1P30953 314 aa15.42■□□□□ 0.06
UBE4B-201ENST00000253251 RPL21P46778 160 aaKnown RBP15.42■□□□□ 0.06
UBE4B-201ENST00000253251 ESRRGP62508 458 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms