RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 SNPHO15079 494 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 SLC2A4P14672 509 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 ZCCHC7Q8N3Z6 543 aaKnown RBP7.72□□□□□ -1.17
RIF1-201ENST00000243326 PPP1R10Q96QC0 940 aaKnown RBP7.72□□□□□ -1.17
RIF1-201ENST00000243326 SYTL2Q9HCH5 934 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 PCDHGB4Q9UN71 923 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 TPP1O14773 563 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 NPTX2P47972 431 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 LINC00116Q8NCU8 138 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 PSMA8Q8TAA3 256 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 MAGEE2Q8TD90 523 aaPredicted RBP7.72□□□□□ -1.17
RIF1-201ENST00000243326 TP53INP1Q96A56 240 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 PROSCO94903 275 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 ATP6AP1LQ52LC2 224 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 TRMT6Q9UJA5 497 aaKnown RBP7.72□□□□□ -1.17
RIF1-201ENST00000243326 DUSP12Q9UNI6 340 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 SHROOM1Q2M3G4 852 aaPredicted RBP7.72□□□□□ -1.17
RIF1-201ENST00000243326 ZNF284Q2VY69 593 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 SULT1C3Q6IMI6 304 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 ACTRT1Q8TDG2 376 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 GPR63Q9BZJ6 419 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 UNC13BO14795 1591 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 SEMA3DO95025 777 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 DGKZQ13574 1117 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 PURBQ96QR8 312 aaKnown RBP7.71□□□□□ -1.17
RIF1-201ENST00000243326 SLC9A8Q9Y2E8 581 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 GAKO14976 1311 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 RIMS1Q86UR5 1692 aaKnown RBP7.71□□□□□ -1.17
RIF1-201ENST00000243326 HEATR9A2RTY3 570 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 EXTL3O43909 919 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 RBP5P82980 135 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 CIAPIN1Q6FI81 312 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 HDDC2Q7Z4H3 204 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 MIB1Q86YT6 1006 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 DDI1Q8WTU0 396 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 NPAS2Q99743 824 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 KLHL1Q9NR64 748 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 FXR2P51116 673 aaKnown RBP eCLIP7.71□□□□□ -1.174e-7■■■■□ 25.9
RIF1-201ENST00000243326 SCUBE3Q8IX30 993 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 DMRTB1Q96MA1 342 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 CITED4Q96RK1 184 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 FGFBP2Q9BYJ0 223 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 SYNDIG1Q9H7V2 258 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 MYRFQ9Y2G1 1151 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 WASF2Q9Y6W5 498 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 O00370 1275 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 ZC3H11AO75152 810 aaKnown RBP eCLIP7.71□□□□□ -1.175e-6■□□□□ 8.5
RIF1-201ENST00000243326 CHN2P52757 468 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 TROAPQ12815 778 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 C16orf86Q6ZW13 317 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 PAWRQ96IZ0 340 aaKnown RBP7.71□□□□□ -1.17
RIF1-201ENST00000243326 FEM1CQ96JP0 617 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 CRYL1Q9Y2S2 319 aa7.71□□□□□ -1.17
RIF1-201ENST00000243326 DNM1LO00429 736 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 VTNP04004 478 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 RALGDSQ12967 914 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 TKFCQ3LXA3 575 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 GK5Q6ZS86 529 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 FAM228AQ86W67 206 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 FAM156AQ8NDB6 213 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 CKAP2Q8WWK9 683 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 CENPTQ96BT3 561 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 SLC10A4Q96EP9 437 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 APOPT1Q96IL0 206 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 FHDC1Q9C0D6 1143 aaPredicted RBP7.71□□□□□ -1.18
RIF1-201ENST00000243326 MRASO14807 208 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 PIGNO95427 931 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 PTGER2P43116 358 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 PDK1Q15118 436 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 ZC3H13Q5T200 1668 aaKnown RBP7.71□□□□□ -1.18
RIF1-201ENST00000243326 F8VP50 259 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 PYGLP06737 847 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 RECQLP46063 649 aaPredicted RBP7.71□□□□□ -1.18
RIF1-201ENST00000243326 FASTKQ14296 549 aaKnown RBP7.71□□□□□ -1.18
RIF1-201ENST00000243326 KBTBD12Q3ZCT8 623 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 COLGALT1Q8NBJ5 622 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 DCUN1D1Q96GG9 259 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 NIF3L1Q9GZT8 377 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 TJP2Q9UDY2 1190 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 PCDHB2Q9Y5E7 798 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 ERCC6L2Q5T890 1561 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 TFECO14948 347 aaPredicted RBP7.71□□□□□ -1.18
RIF1-201ENST00000243326 ATG7O95352 703 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 RABGGTBP53611 331 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 MIIPQ5JXC2 388 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 ARMC4Q5T2S8 1044 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 ELMSAN1Q6PJG2 1045 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.71□□□□□ -1.18
RIF1-201ENST00000243326 RCN3Q96D15 328 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 ZNF624Q9P2J8 865 aaPredicted RBP7.71□□□□□ -1.18
RIF1-201ENST00000243326 SPIDRQ14159 915 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 TRIM69Q86WT6 500 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 STKLD1Q8NE28 680 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 MAGEB10Q96LZ2 347 aaPredicted RBP7.71□□□□□ -1.18
RIF1-201ENST00000243326 SLC5A4Q9NY91 659 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 EPHA3P29320 983 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 ITPK1Q13572 414 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 TSEN34Q9BSV6 310 aaKnown RBP7.71□□□□□ -1.18
RIF1-201ENST00000243326 VTA1Q9NP79 307 aa7.71□□□□□ -1.18
RIF1-201ENST00000243326 VPS45Q9NRW7 570 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms