RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 IRX2Q9BZI1 471 aaPredicted RBP11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 MUC3BQ9H195 1237 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 CRISPLD1Q9H336 500 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 SEPT10Q9P0V9 454 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 DNMT3BQ9UBC3 853 aaKnown RBP11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 ZNF263O14978 683 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 C1RP00736 705 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 ITKQ08881 620 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 PDK2Q15119 407 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 MTSS1LQ765P7 747 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 TMEM139Q8IV31 216 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 ARID3BQ8IVW6 561 aaPredicted RBP11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 CARNMT1Q8N4J0 409 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 PABPC5Q96DU9 382 aaKnown RBP11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 BTN2A3PQ96KV6 586 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 FBXL21Q9UKT6 434 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 MTCH2Q9Y6C9 303 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 CTAGE15A4D2H0 777 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 EPOPA6NHQ4 379 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 MCF2LO15068 1137 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 CTAGE8P0CG41 777 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 RBM10P98175 930 aaKnown RBP11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 ZNF211Q13398 564 aaPredicted RBP11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 TUBB2AQ13885 445 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 PKDCCQ504Y2 493 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 ACBD5Q5T8D3 534 aaPredicted RBP11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 TMCO3Q6UWJ1 677 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 CTAGE6Q86UF2 777 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 CTAGE4Q8IX94 777 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 RSAD2Q8WXG1 361 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 TUBB2BQ9BVA1 445 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 UBE2ZQ9H832 354 aaPredicted RBP11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 GKN1Q9NS71 199 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 FEZ2Q9UHY8 353 aaPredicted RBP11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 VANGL2Q9ULK5 521 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 NCANO14594 1321 aa11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 TDRD15B5MCY1 1934 aaKnown RBP11.54□□□□□ -0.56
TNFAIP3-201ENST00000237289 USP27XA6NNY8 438 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 FECHP22830 423 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 WEE1P30291 646 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 TUBP50607 506 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 RAP1GAP2Q684P5 730 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 PM20D1Q6GTS8 502 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 GPR149Q86SP6 731 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 P3H4Q92791 437 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 NMUR1Q9HB89 426 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 OR12D3Q9UGF7 316 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 COG5Q9UP83 839 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 KRIT1O00522 736 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 APOL1O14791 398 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 LILRB3O75022 631 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 PCK1P35558 622 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 PPP1R7Q15435 360 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 CCDC14Q49A88 953 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 CMTM8Q8IZV2 173 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 TTC13Q8NBP0 860 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 DUS2Q9NX74 493 aaKnown RBP11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 LINC01565O15544 149 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 COCHO43405 550 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 PREPLQ4J6C6 727 aaPredicted RBP11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 IL31Q6EBC2 164 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 CCDC105Q8IYK2 499 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 RYBPQ8N488 228 aaPredicted RBP11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 TBC1D31Q96DN5 1066 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 ZNF148Q9UQR1 794 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 TLR6Q9Y2C9 796 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 C2orf78A6NCI8 922 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 DFFAO00273 331 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 NFATC1O95644 943 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 IFNB1P01574 187 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 ST8SIA6P61647 398 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 CFAP58Q5T655 872 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 ZNF557Q8N988 423 aaPredicted RBP11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 CCDC89Q8N998 374 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 CDH7Q9ULB5 785 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 USP3Q9Y6I4 520 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 CAPN6Q9Y6Q1 641 aa11.53□□□□□ -0.56
TNFAIP3-201ENST00000237289 TANC1Q9C0D5 1861 aa11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 BTNL10A8MVZ5 291 aa11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 IRAK2O43187 625 aa11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 BNIP3LO60238 219 aa11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 ADH1CP00326 375 aa11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 MAN1A1P33908 653 aa11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 ADRA1BP35368 520 aa11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 RECQLP46063 649 aaPredicted RBP11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 ZNF135P52742 658 aaPredicted RBP11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 AIF1P55008 147 aa11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 ADAM15Q13444 863 aa11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 RAB41Q5JT25 222 aa11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 CEP112Q8N8E3 955 aa11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 MAFAQ8NHW3 353 aaPredicted RBP11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 BPIFB1Q8TDL5 484 aa11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 SMARCD2Q92925 531 aa11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 FCRL2Q96LA5 508 aaPredicted RBP11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 TTLL2Q9BWV7 592 aa11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 TRIM7Q9C029 511 aa11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 SMOC2Q9H3U7 446 aa11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 SP110Q9HB58 689 aa11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 GDE1Q9NZC3 331 aa11.52□□□□□ -0.56
TNFAIP3-201ENST00000237289 GRID2IPA4D2P6 1211 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms