RNA–Protein interactions for RNA: ENST00000236850.4

APOA1-201, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-201ENST00000236850 EPC1Q9H2F5 836 aa16.09■□□□□ 0.17
APOA1-201ENST00000236850 PLCB1Q9NQ66 1216 aa16.09■□□□□ 0.17
APOA1-201ENST00000236850 DNAJC17Q9NVM6 304 aaKnown RBP16.09■□□□□ 0.17
APOA1-201ENST00000236850 AJAP1Q9UKB5 411 aaPredicted RBP16.09■□□□□ 0.17
APOA1-201ENST00000236850 PCDHGC3Q9UN70 934 aa16.09■□□□□ 0.17
APOA1-201ENST00000236850 GPR179Q6PRD1 2367 aa16.08■□□□□ 0.17
APOA1-201ENST00000236850 FOXN3O00409 490 aaPredicted RBP16.08■□□□□ 0.16
APOA1-201ENST00000236850 APBB3O95704 486 aa16.08■□□□□ 0.16
APOA1-201ENST00000236850 CALCAP01258 141 aa16.08■□□□□ 0.16
APOA1-201ENST00000236850 KLKB1P03952 638 aa16.08■□□□□ 0.16
APOA1-201ENST00000236850 FNTBP49356 437 aa16.08■□□□□ 0.16
APOA1-201ENST00000236850 KDSRQ06136 332 aa16.08■□□□□ 0.16
APOA1-201ENST00000236850 DMC1Q14565 340 aa16.08■□□□□ 0.16
APOA1-201ENST00000236850 C2orf27AQ580R0 203 aa16.08■□□□□ 0.16
APOA1-201ENST00000236850 NUGGCQ68CJ6 796 aa16.08■□□□□ 0.16
APOA1-201ENST00000236850 DPY19L2P1Q6NXN4 242 aa16.08■□□□□ 0.16
APOA1-201ENST00000236850 DENND1CQ8IV53 801 aa16.08■□□□□ 0.16
APOA1-201ENST00000236850 SCUBE3Q8IX30 993 aa16.08■□□□□ 0.16
APOA1-201ENST00000236850 TERB1Q8NA31 727 aa16.08■□□□□ 0.16
APOA1-201ENST00000236850 RUBCNQ92622 972 aa16.08■□□□□ 0.16
APOA1-201ENST00000236850 ANP32BQ92688 251 aaKnown RBP16.08■□□□□ 0.16
APOA1-201ENST00000236850 EZH1Q92800 747 aaPredicted RBP16.08■□□□□ 0.16
APOA1-201ENST00000236850 FAM149B1Q96BN6 582 aa16.08■□□□□ 0.16
APOA1-201ENST00000236850 HINFPQ9BQA5 517 aa16.08■□□□□ 0.16
APOA1-201ENST00000236850 IRX2Q9BZI1 471 aaPredicted RBP16.08■□□□□ 0.16
APOA1-201ENST00000236850 GANQ9H2C0 597 aa16.08■□□□□ 0.16
APOA1-201ENST00000236850 PDCL3Q9H2J4 239 aa16.08■□□□□ 0.16
APOA1-201ENST00000236850 AGO1Q9UL18 857 aaKnown RBP16.08■□□□□ 0.16
APOA1-201ENST00000236850 MMP17Q9ULZ9 603 aa16.08■□□□□ 0.16
APOA1-201ENST00000236850 FHOD1Q9Y613 1164 aa16.08■□□□□ 0.16
APOA1-201ENST00000236850 KIAA1549LQ6ZVL6 1849 aa16.08■□□□□ 0.16
APOA1-201ENST00000236850 PIK3R2O00459 728 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 CAPN9O14815 690 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 NCAM1P13591 858 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 UCHL3P15374 230 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 DGKEP52429 567 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 SEC13P55735 322 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 POLR2FP61218 127 aaKnown RBP16.07■□□□□ 0.16
APOA1-201ENST00000236850 RING1Q06587 406 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 NNTQ13423 1086 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 DRAP1Q14919 205 aaPredicted RBP16.07■□□□□ 0.16
APOA1-201ENST00000236850 EOGTQ5NDL2 527 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 SPECC1LQ69YQ0 1117 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 HEATR6Q6AI08 1181 aaKnown RBP16.07■□□□□ 0.16
APOA1-201ENST00000236850 PKN3Q6P5Z2 889 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 C12orf40Q86WS4 652 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 SUMF1Q8NBK3 374 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 SPC24Q8NBT2 197 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 TSTD1Q8NFU3 115 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 CPLX3Q8WVH0 158 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 SERPINB11Q96P15 392 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 DDX50Q9BQ39 737 aaKnown RBP16.07■□□□□ 0.16
APOA1-201ENST00000236850 STK33Q9BYT3 514 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 NLRC4Q9NPP4 1024 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 NCDNQ9UBB6 729 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 SFMBT1Q9UHJ3 866 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 SMG5Q9UPR3 1016 aaKnown RBP16.07■□□□□ 0.16
APOA1-201ENST00000236850 ITIH6Q6UXX5 1313 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 SDK1Q7Z5N4 2213 aa16.07■□□□□ 0.16
APOA1-201ENST00000236850 ZNF292O60281 2723 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 GABBR2O75899 941 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 ALDH1A2O94788 518 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 GLI1P08151 1106 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 CDC25BP30305 580 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 CLCN1P35523 988 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 SLC11A2P49281 568 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 DGKGP49619 791 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 PDCLQ13371 301 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 SIM2Q14190 667 aaPredicted RBP16.06■□□□□ 0.16
APOA1-201ENST00000236850 MPPE1Q53F39 396 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 EFHC1Q5JVL4 640 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 C10orf76Q5T2E6 689 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 ADGRF1Q5T601 910 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 SDE2Q6IQ49 451 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 CEP68Q76N32 757 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 PHTF2Q8N3S3 785 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 GPR161Q8N6U8 529 aaKnown RBP16.06■□□□□ 0.16
APOA1-201ENST00000236850 IPO4Q8TEX9 1081 aaKnown RBP16.06■□□□□ 0.16
APOA1-201ENST00000236850 AZIN2Q96A70 460 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 PPP1R13BQ96KQ4 1090 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 SLC2A11Q9BYW1 496 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 SYNCQ9H7C4 482 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 POPDC2Q9HBU9 364 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 POLMQ9NP87 494 aaPredicted RBP16.06■□□□□ 0.16
APOA1-201ENST00000236850 ACP6Q9NPH0 428 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 C2orf42Q9NWW7 574 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 EBF1Q9UH73 591 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 GMEB2Q9UKD1 530 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 STARD13Q9Y3M8 1113 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.06■□□□□ 0.16
APOA1-201ENST00000236850 USP34Q70CQ2 3546 aa16.06■□□□□ 0.16
APOA1-201ENST00000236850 E5RJQ4 531 aa16.05■□□□□ 0.16
APOA1-201ENST00000236850 AXIN1O15169 862 aa16.05■□□□□ 0.16
APOA1-201ENST00000236850 ZBTB24O43167 697 aaPredicted RBP16.05■□□□□ 0.16
APOA1-201ENST00000236850 PENKP01210 267 aaPredicted RBP16.05■□□□□ 0.16
APOA1-201ENST00000236850 TIE1P35590 1138 aa16.05■□□□□ 0.16
APOA1-201ENST00000236850 TBX4P57082 545 aa16.05■□□□□ 0.16
APOA1-201ENST00000236850 YWHAZP63104 245 aaKnown RBP16.05■□□□□ 0.16
APOA1-201ENST00000236850 LAIR1Q6GTX8 287 aa16.05■□□□□ 0.16
APOA1-201ENST00000236850 CACNA2D4Q7Z3S7 1137 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms