RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 ROR1Q01973 937 aa14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 TRPC3Q13507 836 aa14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 PIGHQ14442 188 aaPredicted RBP14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 EML3Q32P44 896 aa14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 UGT2A3Q6UWM9 527 aa14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 SYTL5Q8TDW5 730 aaPredicted RBP14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 RSPH1Q8WYR4 309 aa14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 CISHQ9NSE2 258 aa14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 APOBEC2Q9Y235 224 aaKnown RBP14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 PLLPQ9Y342 182 aa14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 RGL2O15211 777 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 DGKIO75912 1065 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 HDAC4P56524 1084 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 MRPS5P82675 430 aaKnown RBP14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 C6orf52Q5T4I8 152 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 DENND1BQ6P3S1 775 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 RNF111Q6ZNA4 994 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 FBXL18Q96ME1 805 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 HAPLN2Q9GZV7 340 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 SUN2Q9UH99 717 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 PCDHA10Q9Y5I2 948 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 A0A088AWK7 358 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 PMM2O15305 246 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 TGDSO95455 350 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 ALDH1A3P47895 512 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 PODNQ7Z5L7 613 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 WDR75Q8IWA0 830 aaKnown RBP14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 LARGE2Q8N3Y3 721 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 TMIGD2Q96BF3 282 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 PGBD4Q96DM1 585 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 MOCOSQ96EN8 888 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 PLGRKTQ9HBL7 147 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 XAB2Q9HCS7 855 aaKnown RBP14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 XPNPEP1Q9NQW7 623 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 PNPOQ9NVS9 261 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 DDX56Q9NY93 547 aaKnown RBP14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 CAPN14A8MX76 684 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 SMIM18P0DKX4 95 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 CSH1P0DML2 217 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 CSH2P0DML3 217 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 HOXA10P31260 410 aaPredicted RBP14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 SLC5A3P53794 718 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 TMCO4Q5TGY1 634 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 DRICH1Q6PGQ1 229 aaPredicted RBP14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 ARFGAP1Q8N6T3 406 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 DHRS1Q96LJ7 313 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 HEPHQ9BQS7 1158 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 SMYD2Q9NRG4 433 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 AP4B1Q9Y6B7 739 aa14.6□□□□□ -0.07
PCDHB3-201ENST00000231130 POLRMTO00411 1230 aaKnown RBP14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 PLSCR1O15162 318 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 MAFGO15525 162 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 CBFA2T3O75081 653 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 CSDE1O75534 798 aaKnown RBP14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 TNFAIP8O95379 198 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 OXSR1O95747 527 aaPredicted RBP14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 DHRS4L1P0CG22 281 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 MIPP30301 263 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 DLGAP5Q15398 846 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 PTPN20Q4JDL3 420 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 SLC27A3Q5K4L6 730 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 PACS1Q6VY07 963 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 CHSY1Q86X52 802 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 THNSL1Q8IYQ7 743 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 LRRC43Q8N309 656 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 VCPIP1Q96JH7 1222 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 PPCSQ9HAB8 311 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 SSU72Q9NP77 194 aaKnown RBP14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 RSL24D1Q9UHA3 163 aaKnown RBP14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 COL14A1Q05707 1796 aaKnown RBP14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 E9PBE3 544 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 DCXO43602 365 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 KLHL41O60662 606 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 ZC3H11AO75152 810 aaKnown RBP eCLIP14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 TCN1P20061 433 aaPredicted RBP14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 GRIA1P42261 906 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 PGM5Q15124 567 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 PDCD4Q53EL6 469 aaKnown RBP14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 FASTKD1Q53R41 847 aaKnown RBP14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 SPDYAQ5MJ70 313 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 DACT2Q5SW24 774 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 LGSNQ5TDP6 509 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 HACE1Q8IYU2 909 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 WDTC1Q8N5D0 677 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 DEPDC1BQ8WUY9 529 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 ZFRQ96KR1 1074 aaKnown RBP14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 TRPC7Q9HCX4 862 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 PLA2G4CQ9UP65 541 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 AIM2O14862 343 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 COPAP53621 1224 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 PRKCEQ02156 737 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 C15orf59Q2T9L4 293 aaPredicted RBP14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 ZNF362Q5T0B9 420 aaPredicted RBP14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 MPP5Q8N3R9 675 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 DCUN1D1Q96GG9 259 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 COX4I2Q96KJ9 171 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 ST6GALNAC4Q9H4F1 302 aa14.59□□□□□ -0.07
PCDHB3-201ENST00000231130 TMED5Q9Y3A6 229 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms