RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 STRIP2Q9ULQ0 834 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 EFR3BQ9Y2G0 817 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 TMA7Q9Y2S6 64 aaKnown RBP9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 HEMK1Q9Y5R4 338 aaPredicted RBP9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 IKBKGQ9Y6K9 419 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 TRIM49D1C9J1S8 452 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 XPOTO43592 962 aaKnown RBP9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 ANPEPP15144 967 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 POLR2BP30876 1174 aaKnown RBP9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 AP2B1P63010 937 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 CDK16Q00536 496 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 CYTH1Q15438 398 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 CATSPERGQ6ZRH7 1159 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 CYP4V2Q6ZWL3 525 aaPredicted RBP9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 ZNF554Q86TJ5 538 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 SLC4A11Q8NBS3 891 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 ZNF398Q8TD17 642 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 FAF2Q96CS3 445 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 APOPT1Q96IL0 206 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 SLC13A1Q9BZW2 595 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 MINDY3Q9H8M7 445 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 SMYD2Q9NRG4 433 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 NRBP2Q9NSY0 501 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 CNTN3Q9P232 1028 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 IQANK1A0A1B0GTG1 560 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 FZD9O00144 591 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 NFICP08651 508 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 TFPTP0C1Z6 253 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 HPCAP84074 193 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 SLC18A2Q05940 514 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 CDC16Q13042 620 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 TTLL12Q14166 644 aaPredicted RBP9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 C16orf72Q14CZ0 275 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 SH3D19Q5HYK7 790 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 FAM102AQ5T9C2 384 aaPredicted RBP9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 KLC3Q6P597 504 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 TREML1Q86YW5 311 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 MICALL2Q8IY33 904 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 KCNN1Q92952 543 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 ALKBH8Q96BT7 664 aaKnown RBP9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 ABHD8Q96I13 439 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 NLRP4Q96MN2 994 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 SRPK1Q96SB4 655 aaKnown RBP9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 PPP1R16BQ96T49 567 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 C20orf27Q9GZN8 174 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 ARHGEF4Q9NR80 690 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 SH3GLB1Q9Y371 365 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 HEY1Q9Y5J3 304 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 H7C0C1 242 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 INO80B-WBP1J3KQ70 363 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 FCHO1O14526 889 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 MICAL2O94851 1124 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 IQCF3P0C7M6 154 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 ATP5OP48047 213 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 AP3M2P53677 418 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 OAZ1P54368 228 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 IRX4P78413 519 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 ROR1Q01973 937 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 KCNJ11Q14654 390 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 PAOXQ6QHF9 649 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 RIPOR1Q6ZS17 1223 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 RAPH1Q70E73 1250 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 IFT43Q96FT9 208 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 OXNAD1Q96HP4 312 aaPredicted RBP9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 MAGEB5Q9BZ81 275 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 INO80BQ9C086 356 aaPredicted RBP9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 LHX5Q9H2C1 402 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 USP29Q9HBJ7 922 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 PPM1HQ9ULR3 514 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 AK5Q9Y6K8 562 aa9.72□□□□□ -0.85
HLA-DOA-201ENST00000229829 DNAH12Q6ZR08 3092 aa9.71□□□□□ -0.85
HLA-DOA-201ENST00000229829 M0QYV0 167 aa9.71□□□□□ -0.85
HLA-DOA-201ENST00000229829 KCNN4O15554 427 aa9.71□□□□□ -0.85
HLA-DOA-201ENST00000229829 NELFEP18615 380 aaKnown RBP9.71□□□□□ -0.85
HLA-DOA-201ENST00000229829 ICAM3P32942 547 aa9.71□□□□□ -0.85
HLA-DOA-201ENST00000229829 ALDH18A1P54886 795 aaKnown RBP9.71□□□□□ -0.85
HLA-DOA-201ENST00000229829 MRPS5P82675 430 aaKnown RBP9.71□□□□□ -0.85
HLA-DOA-201ENST00000229829 HSDL1Q3SXM5 330 aa9.71□□□□□ -0.85
HLA-DOA-201ENST00000229829 SPDYAQ5MJ70 313 aa9.71□□□□□ -0.85
HLA-DOA-201ENST00000229829 C6orf183Q5T699 404 aa9.71□□□□□ -0.85
HLA-DOA-201ENST00000229829 DUS1LQ6P1R4 473 aaKnown RBP9.71□□□□□ -0.85
HLA-DOA-201ENST00000229829 C1orf127Q8N9H9 656 aa9.71□□□□□ -0.85
HLA-DOA-201ENST00000229829 CCDC110Q8TBZ0 833 aa9.71□□□□□ -0.85
HLA-DOA-201ENST00000229829 FNIP1Q8TF40 1166 aa9.71□□□□□ -0.85
HLA-DOA-201ENST00000229829 CNBD2Q96M20 576 aa9.71□□□□□ -0.85
HLA-DOA-201ENST00000229829 NR2E3Q9Y5X4 410 aa9.71□□□□□ -0.85
HLA-DOA-201ENST00000229829 GJA3Q9Y6H8 435 aa9.71□□□□□ -0.85
HLA-DOA-201ENST00000229829 COPEO14579 308 aa9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 XPO1O14980 1071 aaKnown RBP9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 ARIH2O95376 493 aa9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 ITGB3P05106 788 aa9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 RBL1P28749 1068 aa9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 GPD2P43304 727 aa9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 YWHAZP63104 245 aaKnown RBP9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 PPIDQ08752 370 aaKnown RBP9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 BST1Q10588 318 aa9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 NOMO1Q15155 1222 aa9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 ZNF667Q5HYK9 610 aa9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 SCYL2Q6P3W7 929 aa9.71□□□□□ -0.86
HLA-DOA-201ENST00000229829 DLK2Q6UY11 383 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms