RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 ANAPC2Q9UJX6 822 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 SOX13Q9UN79 622 aa10.84□□□□□ -0.67
TRPS1-201ENST00000220888 RAD51BO15315 384 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 ADCYAP1R1P41586 468 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 DEFA1P59665 94 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 DEFA3P59666 94 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 MYL6P60660 151 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 TSGA10IPQ3SY00 556 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 STOX1Q6ZVD7 989 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 RIBC1Q8N443 379 aaPredicted RBP10.83□□□□□ -0.68
TRPS1-201ENST00000220888 RSPH1Q8WYR4 309 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 PARVBQ9HBI1 364 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 UBA2Q9UBT2 640 aaPredicted RBP10.83□□□□□ -0.68
TRPS1-201ENST00000220888 TRIM10Q9UDY6 481 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 DCDC2Q9UHG0 476 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 GGT7Q9UJ14 662 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 COQ6Q9Y2Z9 468 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 PRDM15P57071 1507 aaPredicted RBP10.83□□□□□ -0.68
TRPS1-201ENST00000220888 FEN1P39748 380 aaKnown RBP10.83□□□□□ -0.68
TRPS1-201ENST00000220888 NCF4Q15080 339 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 CXCL17Q6UXB2 119 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 SIX5Q8N196 739 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 LENG9Q96B70 501 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 DTNBP1Q96EV8 351 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 C2orf49Q9BVC5 232 aaPredicted RBP10.83□□□□□ -0.68
TRPS1-201ENST00000220888 FANCEQ9HB96 536 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 KLHL20Q9Y2M5 609 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 TYMPP19971 482 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 LSP1P33241 339 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 CHRNB3Q05901 458 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 ZNHIT3Q15649 155 aaPredicted RBP10.83□□□□□ -0.68
TRPS1-201ENST00000220888 KCNT1Q5JUK3 1230 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 CCDC81Q6ZN84 652 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 LRRC8DQ7L1W4 858 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 C3orf20Q8ND61 904 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 RUBCNQ92622 972 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 REXO5Q96IC2 774 aaKnown RBP10.83□□□□□ -0.68
TRPS1-201ENST00000220888 CAAP1Q9H8G2 361 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 NEK6Q9HC98 313 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 CYP4F12Q9HCS2 524 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 CISHQ9NSE2 258 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 BARX2Q9UMQ3 279 aaPredicted RBP10.83□□□□□ -0.68
TRPS1-201ENST00000220888 SF3B1O75533 1304 aaKnown RBP eCLIP10.83□□□□□ -0.685e-6■■■■■ 104.4
TRPS1-201ENST00000220888 ERI2A8K979 691 aaKnown RBP10.83□□□□□ -0.68
TRPS1-201ENST00000220888 FAM220BPB1ANY3 271 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 PSMA4P25789 261 aaKnown RBP10.83□□□□□ -0.68
TRPS1-201ENST00000220888 ATP5C1P36542 298 aaKnown RBP10.83□□□□□ -0.68
TRPS1-201ENST00000220888 COPZ1P61923 177 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 MKRN4PQ13434 485 aaPredicted RBP10.83□□□□□ -0.68
TRPS1-201ENST00000220888 KYNUQ16719 465 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 FAM46CQ5VWP2 391 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 FAAH2Q6GMR7 532 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 LZTR1Q8N653 840 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 TMC2Q8TDI7 906 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 CELF6Q96J87 481 aaKnown RBP10.83□□□□□ -0.68
TRPS1-201ENST00000220888 MS4A14Q96JA4 679 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 PRKAG3Q9UGI9 489 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 GPSM3Q9Y4H4 160 aa10.83□□□□□ -0.68
TRPS1-201ENST00000220888 LOC100653049A0A140TA62 436 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 KRT34O76011 436 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 TPBGLP0DKB5 382 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 PABPC1P11940 636 aaKnown RBP10.82□□□□□ -0.68
TRPS1-201ENST00000220888 KLRK1P26718 216 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 PLOD1Q02809 727 aaPredicted RBP10.82□□□□□ -0.68
TRPS1-201ENST00000220888 ADIGQ0VDE8 80 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 CEP78Q5JTW2 689 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 MARK2Q7KZI7 788 aaKnown RBP10.82□□□□□ -0.68
TRPS1-201ENST00000220888 RXFP2Q8WXD0 754 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 DEFB118Q96PH6 123 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 RPTORQ8N122 1335 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 SETD1BQ9UPS6 1966 aaKnown RBP10.82□□□□□ -0.68
TRPS1-201ENST00000220888 LSM8O95777 96 aaKnown RBP10.82□□□□□ -0.68
TRPS1-201ENST00000220888 ZNF682O95780 498 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 HDCP19113 662 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 SPIDRQ14159 915 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 PGM5Q15124 567 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 NR6A1Q15406 480 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.82□□□□□ -0.68
TRPS1-201ENST00000220888 QRFPRQ96P65 431 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 BRD9Q9H8M2 597 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 ACOT9Q9Y305 439 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 DDTLA6NHG4 134 aaPredicted RBP10.82□□□□□ -0.68
TRPS1-201ENST00000220888 ZBTB14O43829 449 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 PARNO95453 639 aaKnown RBP10.82□□□□□ -0.68
TRPS1-201ENST00000220888 GLRBP48167 497 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 NUDT2P50583 147 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 ILF2Q12905 390 aaKnown RBP10.82□□□□□ -0.68
TRPS1-201ENST00000220888 MMRN1Q13201 1228 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 DGKZQ13574 1117 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 GJB7Q6PEY0 223 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 RBM23Q86U06 439 aaKnown RBP10.82□□□□□ -0.68
TRPS1-201ENST00000220888 LRRC6Q86X45 466 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 GLMNQ92990 594 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 UROC1Q96N76 676 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 CBWD1Q9BRT8 395 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 TINF2Q9BSI4 451 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 THTPAQ9BU02 230 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 MANSC1Q9H8J5 431 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 NEUROD4Q9HD90 331 aa10.82□□□□□ -0.68
TRPS1-201ENST00000220888 SIK3Q9Y2K2 1263 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms