RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 IL1R2P27930 398 aa17.6■□□□□ 0.41
CHGA-201ENST00000216492 MIPP30301 263 aa17.6■□□□□ 0.41
CHGA-201ENST00000216492 SDC4P31431 198 aa17.6■□□□□ 0.41
CHGA-201ENST00000216492 RFC2P35250 354 aa17.6■□□□□ 0.41
CHGA-201ENST00000216492 PCK1P35558 622 aa17.6■□□□□ 0.41
CHGA-201ENST00000216492 NDUFV1P49821 464 aa17.6■□□□□ 0.41
CHGA-201ENST00000216492 GTF2A1P52655 376 aaPredicted RBP17.6■□□□□ 0.41
CHGA-201ENST00000216492 SF3A3Q12874 501 aaKnown RBP eCLIP17.6■□□□□ 0.41
CHGA-201ENST00000216492 MPP2Q14168 576 aa17.6■□□□□ 0.41
CHGA-201ENST00000216492 SNCBQ16143 134 aa17.6■□□□□ 0.41
CHGA-201ENST00000216492 EFHC1Q5JVL4 640 aa17.6■□□□□ 0.41
CHGA-201ENST00000216492 BBS12Q6ZW61 710 aa17.6■□□□□ 0.41
CHGA-201ENST00000216492 ARCQ7LC44 396 aa17.6■□□□□ 0.41
CHGA-201ENST00000216492 PARP9Q8IXQ6 854 aa17.6■□□□□ 0.41
CHGA-201ENST00000216492 ZBED8Q8IZ13 594 aa17.6■□□□□ 0.41
CHGA-201ENST00000216492 PKMYT1Q99640 499 aa17.6■□□□□ 0.41
CHGA-201ENST00000216492 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.6■□□□□ 0.41
CHGA-201ENST00000216492 HCSTQ9UBK5 93 aa17.6■□□□□ 0.41
CHGA-201ENST00000216492 USP18Q9UMW8 372 aa17.6■□□□□ 0.41
CHGA-201ENST00000216492 SMG5Q9UPR3 1016 aaKnown RBP17.6■□□□□ 0.41
CHGA-201ENST00000216492 TIMP1P01033 207 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 DESP17661 470 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 BDNFP23560 247 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 ITGB8P26012 769 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 PHBP35232 272 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 SLC11A1P49279 550 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 SLC18A1P54219 525 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 CACNA2D1P54289 1103 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 MRPS5P82675 430 aaKnown RBP17.59■□□□□ 0.41
CHGA-201ENST00000216492 ATP11AP98196 1134 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 HIF1AQ16665 826 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 CDO1Q16878 200 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 KCNT1Q5JUK3 1230 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 SWT1Q5T5J6 900 aaKnown RBP17.59■□□□□ 0.41
CHGA-201ENST00000216492 TRABD2AQ86V40 505 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 CEP57Q86XR8 500 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 PPIL6Q8IXY8 311 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 ZMIZ2Q8NF64 920 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 NDRG1Q92597 394 aaKnown RBP17.59■□□□□ 0.41
CHGA-201ENST00000216492 PRCCQ92733 491 aaPredicted RBP17.59■□□□□ 0.41
CHGA-201ENST00000216492 CSNK1G1Q9HCP0 422 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 PRDM5Q9NQX1 630 aaPredicted RBP17.59■□□□□ 0.41
CHGA-201ENST00000216492 TMEM30AQ9NV96 361 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 SLC24A2Q9UI40 661 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 KIAA0100Q14667 2235 aaKnown RBP17.59■□□□□ 0.41
CHGA-201ENST00000216492 TTC3P53804 2025 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 TRIM43BA6NCK2 446 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 FOXO6A8MYZ6 492 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 NT5C1B-RDH14C9J2C7 533 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 SMAPO00193 183 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 SYN3O14994 580 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 CHUKO15111 745 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 CST8O60676 142 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 GALTP07902 379 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 KRT15P19012 456 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 KDELR1P24390 212 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 TKTL1P51854 596 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 RABGGTBP53611 331 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 ARL4CP56559 192 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 BCAR1P56945 870 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 DYNLT1P63172 113 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 OTUD4Q01804 1114 aaKnown RBP17.59■□□□□ 0.41
CHGA-201ENST00000216492 PDIA2Q13087 525 aaKnown RBP17.59■□□□□ 0.41
CHGA-201ENST00000216492 RASA2Q15283 850 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 SMTNL2Q2TAL5 461 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 FAM171A1Q5VUB5 890 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 SIX6OS1Q8N1H7 587 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 ACTL9Q8TC94 416 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 RSAD2Q8WXG1 361 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 TRIM43Q96BQ3 446 aaPredicted RBP17.59■□□□□ 0.41
CHGA-201ENST00000216492 SMC6Q96SB8 1091 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 RHOBTB2Q9BYZ6 727 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 GPR62Q9BZJ7 368 aa17.59■□□□□ 0.41
CHGA-201ENST00000216492 POC1B-GALNT4F8VUJ3 575 aa17.58■□□□□ 0.4
CHGA-201ENST00000216492 DPYSL4O14531 572 aa17.58■□□□□ 0.4
CHGA-201ENST00000216492 PRPF4O43172 522 aaKnown RBP eCLIP17.58■□□□□ 0.4
CHGA-201ENST00000216492 TRUB2O95900 331 aaKnown RBP17.58■□□□□ 0.4
CHGA-201ENST00000216492 ADCY1Q08828 1119 aa17.58■□□□□ 0.4
CHGA-201ENST00000216492 FAM133BQ5BKY9 247 aaKnown RBP17.58■□□□□ 0.4
CHGA-201ENST00000216492 CCDC63Q8NA47 563 aa17.58■□□□□ 0.4
CHGA-201ENST00000216492 KCTD6Q8NC69 237 aa17.58■□□□□ 0.4
CHGA-201ENST00000216492 FAM149B1Q96BN6 582 aa17.58■□□□□ 0.4
CHGA-201ENST00000216492 TMEM175Q9BSA9 504 aa17.58■□□□□ 0.4
CHGA-201ENST00000216492 TRABDQ9H4I3 376 aa17.58■□□□□ 0.4
CHGA-201ENST00000216492 ABCF3Q9NUQ8 709 aa17.58■□□□□ 0.4
CHGA-201ENST00000216492 CSF2RAP15509 400 aa17.57■□□□□ 0.4
CHGA-201ENST00000216492 RAG1P15918 1043 aa17.57■□□□□ 0.4
CHGA-201ENST00000216492 YWHAZP63104 245 aaKnown RBP17.57■□□□□ 0.4
CHGA-201ENST00000216492 ZKSCAN8Q15776 578 aaPredicted RBP17.57■□□□□ 0.4
CHGA-201ENST00000216492 TAZQ16635 292 aa17.57■□□□□ 0.4
CHGA-201ENST00000216492 VARS2Q5ST30 1063 aaKnown RBP17.57■□□□□ 0.4
CHGA-201ENST00000216492 LRRC43Q8N309 656 aa17.57■□□□□ 0.4
CHGA-201ENST00000216492 NGRNQ9NPE2 291 aaKnown RBP17.57■□□□□ 0.4
CHGA-201ENST00000216492 KLHL14Q9P2G3 628 aa17.57■□□□□ 0.4
CHGA-201ENST00000216492 PSMC3IPQ9P2W1 217 aaPredicted RBP17.57■□□□□ 0.4
CHGA-201ENST00000216492 FETUBQ9UGM5 382 aa17.57■□□□□ 0.4
CHGA-201ENST00000216492 FARP1Q9Y4F1 1045 aaPredicted RBP17.57■□□□□ 0.4
CHGA-201ENST00000216492 SCN5AQ14524 2016 aa17.57■□□□□ 0.4
CHGA-201ENST00000216492 ABHD14A-ACY1A0A1B0GW23 586 aa17.57■□□□□ 0.4
CHGA-201ENST00000216492 DGKIO75912 1065 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms