RNA–Protein interactions for RNA: ENST00000216378.2

CDKL1-201, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKL1, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-201ENST00000216378 KRT10P13645 584 aa11.78□□□□□ -0.52
CDKL1-201ENST00000216378 SESN3P58005 492 aa11.78□□□□□ -0.52
CDKL1-201ENST00000216378 FOXD4Q12950 439 aaPredicted RBP11.78□□□□□ -0.52
CDKL1-201ENST00000216378 SKIV2LQ15477 1246 aaKnown RBP11.78□□□□□ -0.52
CDKL1-201ENST00000216378 SMTNL2Q2TAL5 461 aa11.78□□□□□ -0.52
CDKL1-201ENST00000216378 KBTBD12Q3ZCT8 623 aa11.78□□□□□ -0.52
CDKL1-201ENST00000216378 SLC8B1Q6J4K2 584 aa11.78□□□□□ -0.52
CDKL1-201ENST00000216378 SYCE2Q6PIF2 218 aa11.78□□□□□ -0.52
CDKL1-201ENST00000216378 FUKQ8N0W3 1084 aa11.78□□□□□ -0.52
CDKL1-201ENST00000216378 UBL4BQ8N7F7 174 aa11.78□□□□□ -0.52
CDKL1-201ENST00000216378 OR2W6PQ8NHA6 318 aa11.78□□□□□ -0.52
CDKL1-201ENST00000216378 HAUS1Q96CS2 278 aa11.78□□□□□ -0.52
CDKL1-201ENST00000216378 NGRNQ9NPE2 291 aaKnown RBP11.78□□□□□ -0.52
CDKL1-201ENST00000216378 M0QYV0 167 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 BEST1O76090 585 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 ERBB2P04626 1255 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 CCDC130P13994 396 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 CYP2F1P24903 491 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 GNL1P36915 607 aaPredicted RBP11.77□□□□□ -0.53
CDKL1-201ENST00000216378 PNPLA4P41247 253 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 VPS41P49754 854 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 ITIH3Q06033 890 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 IFFO1Q0D2I5 559 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 DUSP4Q13115 394 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 BLMHQ13867 455 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 TAF5Q15542 800 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 CTC1Q2NKJ3 1217 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 KCNT1Q5JUK3 1230 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 SH3PXD2AQ5TCZ1 1133 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 TMC5Q6UXY8 1006 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 PAQR9Q6ZVX9 377 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 ERICH1Q86X53 443 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 LSM14AQ8ND56 463 aaKnown RBP11.77□□□□□ -0.53
CDKL1-201ENST00000216378 MAFAQ8NHW3 353 aaPredicted RBP11.77□□□□□ -0.53
CDKL1-201ENST00000216378 NSMCE1Q8WV22 266 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 MAGOHBQ96A72 148 aaKnown RBP11.77□□□□□ -0.53
CDKL1-201ENST00000216378 C10orf88Q9H8K7 445 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 GDF3Q9NR23 364 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 HCFC1R1Q9NWW0 138 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 UVRAGQ9P2Y5 699 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 RNF14Q9UBS8 474 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 SNX24Q9Y343 169 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 PCDHA3Q9Y5H8 950 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 MYO15AQ9UKN7 3530 aa11.77□□□□□ -0.53
CDKL1-201ENST00000216378 AGPSO00116 658 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 MICAL2O94851 1124 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 FAM200BP0CF97 657 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 CPB1P15086 417 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 KCNA5P22460 613 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 MMP8P22894 467 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 SP100P23497 879 aaPredicted RBP11.76□□□□□ -0.53
CDKL1-201ENST00000216378 ECHS1P30084 290 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 CTNNA1P35221 906 aaKnown RBP11.76□□□□□ -0.53
CDKL1-201ENST00000216378 RFC1P35251 1148 aaPredicted RBP11.76□□□□□ -0.53
CDKL1-201ENST00000216378 AP3M2P53677 418 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 ENPEPQ07075 957 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 MDH1BQ5I0G3 518 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 LIN9Q5TKA1 542 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 ANKS3Q6ZW76 656 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 IFT20Q8IY31 132 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 TOP6BLQ8N6T0 577 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 PCED1BQ96HM7 432 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 CARD9Q9H257 536 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 MAN1C1Q9NR34 630 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 ATP8A1Q9Y2Q0 1164 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 A8MXQ7 604 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 CILPO75339 1184 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 MTA2O94776 668 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 ABLIM3O94929 683 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 STAU1O95793 577 aaKnown RBP11.76□□□□□ -0.53
CDKL1-201ENST00000216378 RALAP11233 206 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 TYMPP19971 482 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 ATICP31939 592 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 HADHBP55084 474 aaKnown RBP11.76□□□□□ -0.53
CDKL1-201ENST00000216378 NTHL1P78549 312 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 ELAVL2Q12926 359 aaKnown RBP11.76□□□□□ -0.53
CDKL1-201ENST00000216378 ADAM15Q13444 863 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 MTMR3Q13615 1198 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 SEL1L2Q5TEA6 688 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 DNAJC24Q6P3W2 148 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 DCUN1D2Q6PH85 259 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 ZNF677Q86XU0 584 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 UHMK1Q8TAS1 419 aaKnown RBP11.76□□□□□ -0.53
CDKL1-201ENST00000216378 SLC7A14Q8TBB6 771 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 KCNK16Q96T55 309 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 ZNF518BQ9C0D4 1074 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 ZCWPW1Q9H0M4 648 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 SYNCQ9H7C4 482 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 ZWILCHQ9H900 591 aa11.76□□□□□ -0.53
CDKL1-201ENST00000216378 DNAJC17Q9NVM6 304 aaKnown RBP11.76□□□□□ -0.53
CDKL1-201ENST00000216378 ABI2Q9NYB9 513 aaPredicted RBP11.76□□□□□ -0.53
CDKL1-201ENST00000216378 SAE1Q9UBE0 346 aaPredicted RBP11.76□□□□□ -0.53
CDKL1-201ENST00000216378 MTMR11A4FU01 709 aa11.75□□□□□ -0.53
CDKL1-201ENST00000216378 CREB3O43889 395 aa11.75□□□□□ -0.53
CDKL1-201ENST00000216378 WARSP23381 471 aaKnown RBP11.75□□□□□ -0.53
CDKL1-201ENST00000216378 NDUFV1P49821 464 aa11.75□□□□□ -0.53
CDKL1-201ENST00000216378 KCNQ1P51787 676 aa11.75□□□□□ -0.53
CDKL1-201ENST00000216378 DR1Q01658 176 aa11.75□□□□□ -0.53
CDKL1-201ENST00000216378 RAB33AQ14088 237 aa11.75□□□□□ -0.53
CDKL1-201ENST00000216378 SIX1Q15475 284 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms