RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 CASTOR2A6NHX0 329 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 DPYSL4O14531 572 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 TRAPPC3O43617 180 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 B3GAT3O94766 335 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 TYMPP19971 482 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 CD72P21854 359 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 PTPN7P35236 360 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 PCK1P35558 622 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 PLA2G4AP47712 749 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 RPL34P49207 117 aaKnown RBP12.76□□□□□ -0.37
SNU13-201ENST00000215956 ZNF143P52747 638 aaPredicted RBP12.76□□□□□ -0.37
SNU13-201ENST00000215956 SLC6A3Q01959 620 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 PDE4CQ08493 712 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 NNTQ13423 1086 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 WSCD1Q658N2 575 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 SYDE1Q6ZW31 735 aaPredicted RBP12.76□□□□□ -0.37
SNU13-201ENST00000215956 TTC30AQ86WT1 665 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 TMEM130Q8N3G9 435 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 C12orf29Q8N999 325 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 C12orf50Q8NA57 414 aaPredicted RBP12.76□□□□□ -0.37
SNU13-201ENST00000215956 GRK7Q8WTQ7 553 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 MAGOHBQ96A72 148 aaKnown RBP12.76□□□□□ -0.37
SNU13-201ENST00000215956 SYT15Q9BQS2 421 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 CNPY3Q9BT09 278 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 MED10Q9BTT4 135 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 DUSP16Q9BY84 665 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 FAM129AQ9BZQ8 928 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 GDF3Q9NR23 364 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 FAM114A2Q9NRY5 505 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 CYTH4Q9UIA0 394 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 EFR3BQ9Y2G0 817 aa12.76□□□□□ -0.37
SNU13-201ENST00000215956 E5RJQ4 531 aa12.75□□□□□ -0.37
SNU13-201ENST00000215956 TMEM189-UBE2V1I3L0A0 370 aa12.75□□□□□ -0.37
SNU13-201ENST00000215956 RAD51CO43502 376 aa12.75□□□□□ -0.37
SNU13-201ENST00000215956 TJP3O95049 919 aa12.75□□□□□ -0.37
SNU13-201ENST00000215956 KRT1P04264 644 aa12.75□□□□□ -0.37
SNU13-201ENST00000215956 ADRB1P08588 477 aa12.75□□□□□ -0.37
SNU13-201ENST00000215956 HNRNPA1P09651 372 aaKnown RBP eCLIP12.75□□□□□ -0.37
SNU13-201ENST00000215956 FAM200BP0CF97 657 aa12.75□□□□□ -0.37
SNU13-201ENST00000215956 TGM1P22735 817 aa12.75□□□□□ -0.37
SNU13-201ENST00000215956 TARSP26639 723 aaKnown RBP12.75□□□□□ -0.37
SNU13-201ENST00000215956 ADORA2BP29275 332 aa12.75□□□□□ -0.37
SNU13-201ENST00000215956 RFC1P35251 1148 aaPredicted RBP12.75□□□□□ -0.37
SNU13-201ENST00000215956 MARCKSL1P49006 195 aa12.75□□□□□ -0.37
SNU13-201ENST00000215956 EFHC1Q5JVL4 640 aa12.75□□□□□ -0.37
SNU13-201ENST00000215956 PPM1LQ5SGD2 360 aa12.75□□□□□ -0.37
SNU13-201ENST00000215956 BEND6Q5SZJ8 279 aaPredicted RBP12.75□□□□□ -0.37
SNU13-201ENST00000215956 TSSK4Q6SA08 328 aa12.75□□□□□ -0.37
SNU13-201ENST00000215956 PRSS55Q6UWB4 352 aaPredicted RBP12.75□□□□□ -0.37
SNU13-201ENST00000215956 TPRG1Q6ZUI0 275 aa12.75□□□□□ -0.37
SNU13-201ENST00000215956 KCTD13Q8WZ19 329 aa12.75□□□□□ -0.37
SNU13-201ENST00000215956 KXD1Q9BQD3 176 aa12.75□□□□□ -0.37
SNU13-201ENST00000215956 ACBD6Q9BR61 282 aa12.75□□□□□ -0.37
SNU13-201ENST00000215956 FRMD8P1Q9BZ68 369 aaPredicted RBP12.75□□□□□ -0.37
SNU13-201ENST00000215956 UBXN6Q9BZV1 441 aa12.75□□□□□ -0.37
SNU13-201ENST00000215956 TRIM7Q9C029 511 aa12.75□□□□□ -0.37
SNU13-201ENST00000215956 PRMT8Q9NR22 394 aaPredicted RBP12.75□□□□□ -0.37
SNU13-201ENST00000215956 PCYOX1Q9UHG3 505 aa12.75□□□□□ -0.37
SNU13-201ENST00000215956 GMEB2Q9UKD1 530 aa12.75□□□□□ -0.37
SNU13-201ENST00000215956 SF3B1O75533 1304 aaKnown RBP eCLIP12.74□□□□□ -0.378e-6■■■■■ 107
SNU13-201ENST00000215956 M0QZQ0 153 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 TBC1D4O60343 1298 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 FBXO21O94952 628 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 C8AP07357 584 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 LMO2P25791 158 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 HOXA9P31269 272 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 SDC4P31431 198 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 DR1Q01658 176 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 GUCY2DQ02846 1103 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 RTP2Q5QGT7 225 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 FAM183BPQ6ZVS7 135 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 OSTM1Q86WC4 334 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 ITFG1Q8TB96 612 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 SLC2A14Q8TDB8 520 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 CLDN23Q96B33 292 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 SUSD3Q96L08 255 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 OSBPL8Q9BZF1 889 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 DDX47Q9H0S4 455 aaKnown RBP12.74□□□□□ -0.37
SNU13-201ENST00000215956 DPEP3Q9H4B8 488 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 LRRC19Q9H756 370 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 LRRC4Q9HBW1 653 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 EPB41L5Q9HCM4 733 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 PARD6AQ9NPB6 346 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 PCDHB8Q9UN66 801 aa12.74□□□□□ -0.37
SNU13-201ENST00000215956 PDCD11Q14690 1871 aaKnown RBP12.74□□□□□ -0.37
SNU13-201ENST00000215956 NDC80O14777 642 aa12.73□□□□□ -0.37
SNU13-201ENST00000215956 NCAM2O15394 837 aa12.73□□□□□ -0.37
SNU13-201ENST00000215956 CCL16O15467 120 aa12.73□□□□□ -0.37
SNU13-201ENST00000215956 XYLBO75191 536 aa12.73□□□□□ -0.37
SNU13-201ENST00000215956 TADA2AO75478 443 aa12.73□□□□□ -0.37
SNU13-201ENST00000215956 GLI1P08151 1106 aa12.73□□□□□ -0.37
SNU13-201ENST00000215956 CCDC130P13994 396 aa12.73□□□□□ -0.37
SNU13-201ENST00000215956 PDGFRAP16234 1089 aa12.73□□□□□ -0.37
SNU13-201ENST00000215956 RPS9P46781 194 aaKnown RBP12.73□□□□□ -0.37
SNU13-201ENST00000215956 TAS2R40P59535 323 aa12.73□□□□□ -0.37
SNU13-201ENST00000215956 TSPY1Q01534 308 aa12.73□□□□□ -0.37
SNU13-201ENST00000215956 PMF1Q6P1K2 205 aa12.73□□□□□ -0.37
SNU13-201ENST00000215956 OLFML1Q6UWY5 402 aa12.73□□□□□ -0.37
SNU13-201ENST00000215956 SLC26A9Q7LBE3 791 aa12.73□□□□□ -0.37
SNU13-201ENST00000215956 TTC13Q8NBP0 860 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms