RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 C16orf46Q6P387 395 aa12.46□□□□□ -0.41
CHPF2-201ENST00000035307 TRIM67Q6ZTA4 783 aa12.46□□□□□ -0.41
CHPF2-201ENST00000035307 TFAP2DQ7Z6R9 452 aa12.46□□□□□ -0.41
CHPF2-201ENST00000035307 TRIM42Q8IWZ5 723 aa12.46□□□□□ -0.41
CHPF2-201ENST00000035307 YME1L1Q96TA2 773 aa12.46□□□□□ -0.41
CHPF2-201ENST00000035307 NCAPGQ9BPX3 1015 aa12.46□□□□□ -0.41
CHPF2-201ENST00000035307 PAK5Q9P286 719 aa12.46□□□□□ -0.41
CHPF2-201ENST00000035307 SLC39A10Q9ULF5 831 aa12.46□□□□□ -0.41
CHPF2-201ENST00000035307 SMG5Q9UPR3 1016 aaKnown RBP12.46□□□□□ -0.41
CHPF2-201ENST00000035307 COL2A1P02458 1487 aaPredicted RBP12.46□□□□□ -0.41
CHPF2-201ENST00000035307 SMIM35A0A1B0GVV1 85 aa12.46□□□□□ -0.42
CHPF2-201ENST00000035307 A0A1W2PPM1 405 aa12.46□□□□□ -0.42
CHPF2-201ENST00000035307 F8W810 466 aa12.46□□□□□ -0.42
CHPF2-201ENST00000035307 DNALI1O14645 258 aaPredicted RBP12.46□□□□□ -0.42
CHPF2-201ENST00000035307 TSPAN3O60637 253 aa12.46□□□□□ -0.42
CHPF2-201ENST00000035307 LGR5O75473 907 aa12.46□□□□□ -0.42
CHPF2-201ENST00000035307 ZNF865P0CJ78 1059 aaPredicted RBP12.46□□□□□ -0.42
CHPF2-201ENST00000035307 PCSK1P29120 753 aa12.46□□□□□ -0.42
CHPF2-201ENST00000035307 RPA3P35244 121 aaPredicted RBP12.46□□□□□ -0.42
CHPF2-201ENST00000035307 RPL10AP62906 217 aaKnown RBP12.46□□□□□ -0.42
CHPF2-201ENST00000035307 STX3Q13277 289 aa12.46□□□□□ -0.42
CHPF2-201ENST00000035307 RABGAP1LQ5R372 815 aa12.46□□□□□ -0.42
CHPF2-201ENST00000035307 C10orf120Q5SQS8 335 aa12.46□□□□□ -0.42
CHPF2-201ENST00000035307 C9orf57Q5W0N0 161 aa12.46□□□□□ -0.42
CHPF2-201ENST00000035307 PMF1Q6P1K2 205 aa12.46□□□□□ -0.42
CHPF2-201ENST00000035307 LRRC43Q8N309 656 aa12.46□□□□□ -0.42
CHPF2-201ENST00000035307 ALKBH8Q96BT7 664 aaKnown RBP12.46□□□□□ -0.42
CHPF2-201ENST00000035307 CNPY3Q9BT09 278 aa12.46□□□□□ -0.42
CHPF2-201ENST00000035307 UBXN6Q9BZV1 441 aa12.46□□□□□ -0.42
CHPF2-201ENST00000035307 ZNF518BQ9C0D4 1074 aa12.46□□□□□ -0.42
CHPF2-201ENST00000035307 VCXQ9H320 206 aa12.46□□□□□ -0.42
CHPF2-201ENST00000035307 CERS4Q9HA82 394 aa12.46□□□□□ -0.42
CHPF2-201ENST00000035307 ACSS2Q9NR19 701 aa12.46□□□□□ -0.42
CHPF2-201ENST00000035307 IL1RAPL1Q9NZN1 696 aa12.46□□□□□ -0.42
CHPF2-201ENST00000035307 NCANO14594 1321 aa12.46□□□□□ -0.42
CHPF2-201ENST00000035307 MYBPHLA2RUH7 354 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 CYP1A2P05177 515 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 SNRPAP09012 282 aaKnown RBP12.45□□□□□ -0.42
CHPF2-201ENST00000035307 CALRP27797 417 aaKnown RBP12.45□□□□□ -0.42
CHPF2-201ENST00000035307 FAAP100Q0VG06 881 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 C12orf56Q8IXR9 622 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 BORCS6Q96GS4 357 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 TMEM169Q96HH4 297 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 ZCWPW1Q9H0M4 648 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 SDCBP2Q9H190 292 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 ST6GALNAC4Q9H4F1 302 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 C20orf96Q9NUD7 363 aaPredicted RBP12.45□□□□□ -0.42
CHPF2-201ENST00000035307 LOC102724159A0A0B4J2E5 919 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 GOLGA8QA0A0J9YX86 632 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 GOLGA8OA6NCC3 632 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 GOLGA8NF8WBI6 632 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 MDM4O15151 490 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 SMIM24O75264 130 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 ERBB2P04626 1255 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 SKOR1P84550 965 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 PWP2Q15269 919 aaKnown RBP12.45□□□□□ -0.42
CHPF2-201ENST00000035307 TAF1BQ53T94 588 aaPredicted RBP12.45□□□□□ -0.42
CHPF2-201ENST00000035307 ANKRD20A8PQ5CZ79 823 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 BZW1Q7L1Q6 419 aaKnown RBP12.45□□□□□ -0.42
CHPF2-201ENST00000035307 CDC26Q8NHZ8 85 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 GSDMBQ8TAX9 411 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 SIX4Q9UIU6 781 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 TRDMT1O14717 391 aaKnown RBP12.45□□□□□ -0.42
CHPF2-201ENST00000035307 SKAP2O75563 359 aaPredicted RBP12.45□□□□□ -0.42
CHPF2-201ENST00000035307 F2P00734 622 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 PTPN1P18031 435 aaKnown RBP12.45□□□□□ -0.42
CHPF2-201ENST00000035307 KCNJ2P63252 427 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 KBTBD12Q3ZCT8 623 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 UNC45BQ8IWX7 931 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 AFAP1L2Q8N4X5 818 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 NOCTQ9UK39 431 aaKnown RBP12.45□□□□□ -0.42
CHPF2-201ENST00000035307 JCHAINP01591 159 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 ALDH2P05091 517 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 MYL2P10916 166 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 ODC1P11926 461 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 SYN1P17600 705 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 GRM5P41594 1212 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 MOGSQ13724 837 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 KYAT1Q16773 422 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 LAYNQ6UX15 382 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 DPF3Q92784 378 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 SLITRK1Q96PX8 696 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 APOL5Q9BWW9 433 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 TLL2Q9Y6L7 1015 aa12.45□□□□□ -0.42
CHPF2-201ENST00000035307 ARL5CA6NH57 179 aa12.44□□□□□ -0.42
CHPF2-201ENST00000035307 AIM2O14862 343 aa12.44□□□□□ -0.42
CHPF2-201ENST00000035307 CLGNO14967 610 aa12.44□□□□□ -0.42
CHPF2-201ENST00000035307 CYP2F1P24903 491 aa12.44□□□□□ -0.42
CHPF2-201ENST00000035307 WEE1P30291 646 aa12.44□□□□□ -0.42
CHPF2-201ENST00000035307 USP10Q14694 798 aaKnown RBP12.44□□□□□ -0.42
CHPF2-201ENST00000035307 ANO4Q32M45 955 aa12.44□□□□□ -0.42
CHPF2-201ENST00000035307 BOLA3Q53S33 107 aa12.44□□□□□ -0.42
CHPF2-201ENST00000035307 POU5F2Q8N7G0 328 aa12.44□□□□□ -0.42
CHPF2-201ENST00000035307 B3GALNT2Q8NCR0 500 aa12.44□□□□□ -0.42
CHPF2-201ENST00000035307 LMO3Q8TAP4 145 aa12.44□□□□□ -0.42
CHPF2-201ENST00000035307 STAMBPL1Q96FJ0 436 aa12.44□□□□□ -0.42
CHPF2-201ENST00000035307 HIPK3Q9H422 1215 aa12.44□□□□□ -0.42
CHPF2-201ENST00000035307 TASP1Q9H6P5 420 aa12.44□□□□□ -0.42
CHPF2-201ENST00000035307 PACSIN3Q9UKS6 424 aa12.44□□□□□ -0.42
CHPF2-201ENST00000035307 SNX10Q9Y5X0 201 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms