RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 CPSF2Q9P2I0 782 aaKnown RBP14.5□□□□□ -0.09
USH1C-201ENST00000005226 PSAT1Q9Y617 370 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 MGAMO43451 1857 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 TRDMT1O14717 391 aaKnown RBP14.5□□□□□ -0.09
USH1C-201ENST00000005226 DPEP1P16444 411 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 NCF2P19878 526 aaPredicted RBP14.5□□□□□ -0.09
USH1C-201ENST00000005226 SLC1A6P48664 564 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 SESN2P58004 480 aaPredicted RBP14.5□□□□□ -0.09
USH1C-201ENST00000005226 ASPHQ12797 758 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 GRM1Q13255 1194 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 CNPY1Q3B7I2 92 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 DNAL1Q4LDG9 190 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 WDR78Q5VTH9 848 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 GSDMBQ8TAX9 411 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 AGR3Q8TD06 166 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 OXCT2Q9BYC2 517 aaPredicted RBP14.5□□□□□ -0.09
USH1C-201ENST00000005226 MAN1C1Q9NR34 630 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 RNF19AQ9NV58 838 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 THAP1Q9NVV9 213 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 HACL1Q9UJ83 578 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 TSPAN16Q9UKR8 245 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 SOX13Q9UN79 622 aa14.5□□□□□ -0.09
USH1C-201ENST00000005226 BRWD3Q6RI45 1802 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 FAM159BA6NKW6 160 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 TPP1O14773 563 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 FGF3P11487 239 aaPredicted RBP14.49□□□□□ -0.09
USH1C-201ENST00000005226 CRABP2P29373 138 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 HSPA1LP34931 641 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 CCNIQ14094 377 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 HSDL1Q3SXM5 330 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 MBLAC2Q68D91 279 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 MTHFD1LQ6UB35 978 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 HPS6Q86YV9 775 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 TRAPPC9Q96Q05 1148 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 PICK1Q9NRD5 415 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 PDP2Q9P2J9 529 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 B4GALT4O60513 344 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 OPHN1O60890 802 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 ALDOAP04075 364 aaKnown RBP14.49□□□□□ -0.09
USH1C-201ENST00000005226 PFKMP08237 780 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 PEX2P28328 305 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 GABRB2P47870 512 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 AQP4P55087 323 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 WASHC5Q12768 1159 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 MSLNQ13421 630 aaPredicted RBP14.49□□□□□ -0.09
USH1C-201ENST00000005226 PDE1CQ14123 709 aaPredicted RBP14.49□□□□□ -0.09
USH1C-201ENST00000005226 EFHC1Q5JVL4 640 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 PMF1Q6P1K2 205 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 C10orf107Q8IVU9 208 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 PHTF2Q8N3S3 785 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 ATXN7L3BQ96GX2 97 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 CPB2Q96IY4 423 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 RNPEPQ9H4A4 650 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 PTPRHQ9HD43 1115 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 FAM49BQ9NUQ9 324 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 ADAMTS5Q9UNA0 930 aa14.49□□□□□ -0.09
USH1C-201ENST00000005226 SPDYE16A6NNV3 312 aaPredicted RBP14.48□□□□□ -0.09
USH1C-201ENST00000005226 ZBTB42B2RXF5 422 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 TXNDC9O14530 226 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 SIN3BO75182 1162 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 ARIH2O95376 493 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 GRIA2P42262 883 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 ABCG1P45844 678 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 GTF2A2P52657 109 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 IGBP1P78318 339 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 DLG1Q12959 904 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 OLIG2Q13516 323 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 RABGAP1LQ5R372 815 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 TMCO4Q5TGY1 634 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 IER5Q5VY09 327 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 CATSPERGQ6ZRH7 1159 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 MAP7D3Q8IWC1 876 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 PIWIL2Q8TC59 973 aaKnown RBP14.48□□□□□ -0.09
USH1C-201ENST00000005226 CLEC4CQ8WTT0 213 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 CLMNQ96JQ2 1002 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 NR1H4Q96RI1 486 aaPredicted RBP14.48□□□□□ -0.09
USH1C-201ENST00000005226 DHX35Q9H5Z1 703 aaKnown RBP14.48□□□□□ -0.09
USH1C-201ENST00000005226 ETAA1Q9NY74 926 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 APOBEC2Q9Y235 224 aaKnown RBP14.48□□□□□ -0.09
USH1C-201ENST00000005226 STAG3L1P0CL83 205 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 CYP2F1P24903 491 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 IDH3AP50213 366 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 SURF1Q15526 300 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 KCNT2Q6UVM3 1135 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 APLFQ8IW19 511 aaPredicted RBP14.48□□□□□ -0.09
USH1C-201ENST00000005226 WDR75Q8IWA0 830 aaKnown RBP14.48□□□□□ -0.09
USH1C-201ENST00000005226 HACE1Q8IYU2 909 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 HPDLQ96IR7 371 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 PPP1R36Q96LQ0 422 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 CXCL16Q9H2A7 254 aa14.48□□□□□ -0.09
USH1C-201ENST00000005226 G3BP2Q9UN86 482 aaKnown RBP14.48□□□□□ -0.09
USH1C-201ENST00000005226 BCLAF3A2AJT9 711 aaKnown RBP14.47□□□□□ -0.09
USH1C-201ENST00000005226 GABBR2O75899 941 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 AOC1P19801 751 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 ICAM3P32942 547 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 SERPINB6P35237 376 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 PHKA2P46019 1235 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 USP4Q13107 963 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 GSTA3Q16772 222 aa14.47□□□□□ -0.09
USH1C-201ENST00000005226 GOLGA7BQ2TAP0 167 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms