RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Phf24Q80TL4 400 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 1700001K19RikQ80ZT1 219 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Prr11Q8BHE0 368 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Gpr20Q8BYC4 358 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Snx30Q8CE50 437 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Ablim1Q8K4G5 861 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Pcdh18Q8VHR0 1134 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Mcrs1Q99L90 462 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 CoprsQ9CQ13 173 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Med10Q9CXU0 135 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Kif26aQ52KG5 1881 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Cdr2lA2A6T1 465 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 2610008E11RikG3X964 669 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Tspyl1O88852 379 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 SftpbP50405 377 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Sesn2P58043 480 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Gabrb2P63137 512 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 9130409I23RikQ3TS87 320 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Fcrl5Q68SN8 596 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Rhpn2Q8BWR8 686 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Lrif1Q8CDD9 755 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Cog3Q8CI04 820 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 PygbQ8CI94 843 aaKnown RBP18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Grk2Q99MK8 689 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Tspan17Q9D7W4 270 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Caln1Q9JJG7 219 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Msl3Q9WVG9 525 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Map2k5Q9WVS7 448 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Mbd1Q9Z2E2 636 aa18.91■□□□□ 0.62
Trim47-202ENSMUST00000106441 Gm29133A0A1B0GT72 266 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 Smok3aC0HKC8 504 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 Smok3bC0HKC9 504 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 MttpO08601 894 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 P01644 108 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 P01645 108 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 P01646 108 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 P01647 108 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 Arf4P61750 180 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 Ano7Q14AT5 859 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 Xlr3aQ60595 226 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 PrkciQ62074 595 aaKnown RBP18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 Brsk2Q69Z98 735 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 PimregQ8BFY7 231 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 Fam160b1Q8CDM8 764 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 Kat14Q8CID0 779 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 Il36gQ8R460 164 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 Angel1Q8VCU0 667 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 Fam192aQ91WE2 254 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 Trps1Q925H1 1281 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 Zfp64Q99KE8 643 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 Tomm20lQ9D4V6 152 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 Ttc33Q9D6K7 262 aa18.9■□□□□ 0.62
Trim47-202ENSMUST00000106441 Atp8b4A2ANX3 1194 aa18.89■□□□□ 0.62
Trim47-202ENSMUST00000106441 Lilra5D3Z7A9 295 aa18.89■□□□□ 0.62
Trim47-202ENSMUST00000106441 Zc3h7aE9PWW6 970 aaKnown RBP18.89■□□□□ 0.62
Trim47-202ENSMUST00000106441 Vmn2r39L7N2E5 861 aa18.89■□□□□ 0.62
Trim47-202ENSMUST00000106441 Akap1O08715 857 aaKnown RBP18.89■□□□□ 0.62
Trim47-202ENSMUST00000106441 Cbfa2t2O70374 594 aa18.89■□□□□ 0.62
Trim47-202ENSMUST00000106441 Ccnb1P24860 430 aa18.89■□□□□ 0.62
Trim47-202ENSMUST00000106441 Fam198aQ3UY90 562 aa18.89■□□□□ 0.62
Trim47-202ENSMUST00000106441 Cyp3a16Q64481 504 aa18.89■□□□□ 0.62
Trim47-202ENSMUST00000106441 Ino80dQ66JY2 873 aaKnown RBP18.89■□□□□ 0.62
Trim47-202ENSMUST00000106441 Olfr670Q7TRP3 312 aa18.89■□□□□ 0.62
Trim47-202ENSMUST00000106441 Suz12Q80U70 741 aaKnown RBP18.89■□□□□ 0.62
Trim47-202ENSMUST00000106441 Crybg3Q80W49 1005 aa18.89■□□□□ 0.62
Trim47-202ENSMUST00000106441 Chn2Q80XD1 332 aa18.89■□□□□ 0.62
Trim47-202ENSMUST00000106441 Qsox1Q8BND5 748 aa18.89■□□□□ 0.62
Trim47-202ENSMUST00000106441 Enpp4Q8BTJ4 456 aa18.89■□□□□ 0.62
Trim47-202ENSMUST00000106441 Syt15Q8C6N3 418 aa18.89■□□□□ 0.62
Trim47-202ENSMUST00000106441 SmtnQ921U8 923 aa18.89■□□□□ 0.62
Trim47-202ENSMUST00000106441 MtrexQ9CZU3 1040 aaKnown RBP18.89■□□□□ 0.62
Trim47-202ENSMUST00000106441 Nt5c3aQ9D020 331 aa18.89■□□□□ 0.62
Trim47-202ENSMUST00000106441 Plod1Q9R0E2 728 aa18.89■□□□□ 0.62
Trim47-202ENSMUST00000106441 HttP42859 3119 aa18.89■□□□□ 0.61
Trim47-202ENSMUST00000106441 0610012G03RikA0A0J9YTR2 95 aa18.89■□□□□ 0.61
Trim47-202ENSMUST00000106441 Pdcd2P46718 343 aa18.89■□□□□ 0.61
Trim47-202ENSMUST00000106441 GsrP47791 500 aa18.89■□□□□ 0.61
Trim47-202ENSMUST00000106441 Stx2Q00262 289 aa18.89■□□□□ 0.61
Trim47-202ENSMUST00000106441 Zbtb48Q1H9T6 681 aa18.89■□□□□ 0.61
Trim47-202ENSMUST00000106441 Olfr299Q7TS05 330 aa18.89■□□□□ 0.61
Trim47-202ENSMUST00000106441 Rsl1d1Q8BVY0 452 aaKnown RBP18.89■□□□□ 0.61
Trim47-202ENSMUST00000106441 Trub1Q8C0D0 338 aaKnown RBP18.89■□□□□ 0.61
Trim47-202ENSMUST00000106441 Q8CD60 292 aa18.89■□□□□ 0.61
Trim47-202ENSMUST00000106441 Lamtor4Q8CF66 99 aa18.89■□□□□ 0.61
Trim47-202ENSMUST00000106441 Mgat5Q8R4G6 740 aa18.89■□□□□ 0.61
Trim47-202ENSMUST00000106441 Pomgnt1Q91X88 660 aa18.89■□□□□ 0.61
Trim47-202ENSMUST00000106441 Slc39a3Q99K24 317 aa18.89■□□□□ 0.61
Trim47-202ENSMUST00000106441 Trem2Q99NH8 227 aa18.89■□□□□ 0.61
Trim47-202ENSMUST00000106441 MceeQ9D1I5 178 aa18.89■□□□□ 0.61
Trim47-202ENSMUST00000106441 Tmem59Q9QY73 323 aa18.89■□□□□ 0.61
Trim47-202ENSMUST00000106441 Pcbp1P60335 356 aaKnown RBP18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Ccdc127Q3TC33 260 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Pdp2Q504M2 532 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Zbtb8osQ505B7 168 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 SnrpaQ62189 287 aaKnown RBP18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Arl13bQ640N2 427 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Arhgap20Q6IFT4 1182 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Dnajc6Q80TZ3 938 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Atg16l1Q8C0J2 607 aa18.88■□□□□ 0.61
Trim47-202ENSMUST00000106441 Rfx6Q8C7R7 927 aa18.88■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms