RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Ptgs2Q05769 604 aa16.83■□□□□ 0.29
Col17a1-202ENSMUST00000086923 Nat9Q3UG98 241 aa16.83■□□□□ 0.29
Col17a1-202ENSMUST00000086923 Soat1Q61263 540 aa16.83■□□□□ 0.29
Col17a1-202ENSMUST00000086923 Pik3r3Q64143 461 aa16.83■□□□□ 0.29
Col17a1-202ENSMUST00000086923 Trub2Q91WG3 331 aaKnown RBP16.83■□□□□ 0.29
Col17a1-202ENSMUST00000086923 Mrpl2Q9D773 306 aaKnown RBP16.83■□□□□ 0.29
Col17a1-202ENSMUST00000086923 Rbp3P49194 1234 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Psme3P61290 254 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 CrkQ64010 304 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Cyp2c29Q64458 490 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Fam196bQ6GQV1 535 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Podnl1Q6P3Y9 559 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Nemp2Q8CB65 421 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Reep2Q8VCD6 254 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Limd1Q9QXD8 668 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Kcnu1O54982 1121 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Psma3O70435 255 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Ugt1a9Q62452 528 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Rsl1d1Q8BVY0 452 aaKnown RBP16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Taf2Q8C176 1104 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Prkd3Q8K1Y2 889 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Zbtb1Q91VL9 713 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Ndufb5Q9CQH3 189 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Actl7aQ9QY84 440 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Abcc2Q8VI47 1543 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Gm20911A0A087WSS0 222 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Supt3B0QZW4 406 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Pagr1bF6V0H0 108 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Gm13128L7MU96 475 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Slc2a4P14142 509 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 EgfrQ01279 1210 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Zscan26Q5RJ54 466 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Nlrp9bQ66X22 1003 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Scaf8Q6DID3 1268 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Prpf19Q99KP6 504 aaKnown RBP16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Gtf2ird2Q99NI3 936 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Klhl28Q9CR40 571 aa16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Ehd1Q9WVK4 534 aaKnown RBP16.83■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Trpm2Q91YD4 1506 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 CemipQ8BI06 1361 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Gm8050L7N2E3 205 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Cdc25cP48967 447 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Sgo2Q7TSY8 1164 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Rassf9Q8K342 435 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Plbd1Q8VCI0 550 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Q9CPS8 106 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Ift22Q9DAI2 185 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Zbed5B2RPU8 756 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Vbp1P61759 196 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Zfp217Q3U0X6 1041 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Bbs1Q3V3N7 593 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Vsx2Q61412 361 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 TsnQ62348 228 aaKnown RBP16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Prdm8Q8BZ97 687 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Fam45aQ9D8N2 357 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Zmym2Q9CU65 1376 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Pcna-ps2A0A140T8V5 261 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Cyp2b9P12790 491 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Gsta1P13745 223 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Gnb5P62881 395 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Gsta1Q6P8Q0 223 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Elmo1Q8BPU7 727 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 PrkxQ922R0 355 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Get4Q9D1H7 327 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 PrccQ9EQC8 491 aaKnown RBP16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 FancaQ9JL70 1439 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 TprnA2AI08 749 aaKnown RBP16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 GabrdP22933 449 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Nedd1P33215 660 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 SpoplQ2M2N2 392 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Nek10Q3UGM2 1111 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Ankrd42Q3V096 527 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 GanQ8CA72 597 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 HpdlQ8K248 371 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Trpv3Q8K424 791 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Kbtbd4Q8R179 534 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Dhx36Q8VHK9 1001 aaKnown RBP16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 MyocdQ8VIM5 935 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Ten1Q9D7K2 161 aa16.82■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Olfr600E9PUN7 314 aa16.81■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Ampd1Q3V1D3 745 aa16.81■□□□□ 0.28
Col17a1-202ENSMUST00000086923 BC030870Q3V2G4 71 aa16.81■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Armc5Q5EBP3 926 aa16.81■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Prrg3Q6PAQ9 231 aa16.81■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Ing4Q8C0D7 249 aa16.81■□□□□ 0.28
Col17a1-202ENSMUST00000086923 LaynQ8C351 381 aa16.81■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Pop1Q8K205 1045 aa16.81■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Tada1Q99LM9 335 aa16.81■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Ddx50Q99MJ9 734 aaKnown RBP16.81■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Ddi2A2ADY9 399 aa16.81■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Slc9a3G3X939 829 aa16.81■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Gm6502L7N456 481 aa16.81■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Guca2bO09051 106 aa16.81■□□□□ 0.28
Col17a1-202ENSMUST00000086923 FdxrQ61578 494 aa16.81■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Plekhn1Q8C886 359 aa16.81■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Mcfd2Q8K5B2 145 aa16.81■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Vps4aQ8VEJ9 437 aa16.81■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Itgb3bpQ9CQ82 176 aa16.81■□□□□ 0.28
Col17a1-202ENSMUST00000086923 RptorQ8K4Q0 1335 aa16.81■□□□□ 0.28
Col17a1-202ENSMUST00000086923 Ppm1aP49443 382 aa16.81■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 23 ms