RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Mfap3lQ9D3X9 409 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ccdc91Q9D8L5 442 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ccdc182Q9D9C6 152 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gm3854A0A1B0GSS6 495 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gm21293E9Q4G9 266 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Man2b1O09159 1013 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gsta4P24472 222 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Slc16a1P53986 493 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Spout1Q3UHX9 385 aaKnown RBP7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Pacsin1Q61644 441 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Tbc1d30Q69ZT9 766 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Paqr9Q6TCG2 375 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 MogsQ80UM7 834 aaKnown RBP7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Slc20a2Q80UP8 656 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 TdrkhQ80VL1 560 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Slc38a9Q8BGD6 560 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mtnr1bQ8CIQ6 364 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 FntbQ8K2I1 437 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Vangl2Q91ZD4 521 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Rab11fip1Q9D620 645 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ccdc70Q9D9B0 223 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Slc25a19Q9DAM5 318 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gdap2Q9DBL2 498 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Itgb1bp2Q9R000 350 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 TfgQ9Z1A1 397 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Tp53bp1P70399 1969 aa7.15□□□□□ -1.27
Bdnf-201ENSMUST00000053317 PatjQ63ZW7 1834 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Zfp626A0A0U1RQ84 676 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Plekhg4A0A1L1SU27 1217 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gm6588E9Q3K0 461 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Tnk2O54967 1055 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 YwhagP61982 247 aaKnown RBP7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 9130409I23RikQ3TS87 320 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Rap1gap2Q5SVL6 712 aaKnown RBP7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ccdc125Q5U465 500 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Arnt2Q61324 712 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Anks6Q6GQX6 883 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Q8BHR8 331 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Iars2Q8BIJ6 1012 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Dclk3Q8BWQ5 790 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Slc9a9Q8BZ00 644 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Snrnp27Q8K194 155 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Spata4Q8K3V1 295 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Tbx22Q8K402 517 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Wbp11Q923D5 641 aaKnown RBP7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Sec13Q9D1M0 322 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 DlstQ9D2G2 454 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Lman2Q9DBH5 358 aaKnown RBP7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Tlr9Q9EQU3 1032 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Psma7Q9Z2U0 248 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Spta1P08032 2415 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Iqca1lA6H690 825 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Oaz2O08608 189 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Aff1O88573 1216 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mup5P11591 180 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ptger1P35375 405 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 PolgP54099 1218 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Tmem35bQ3U0Y2 150 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Skap2Q3UND0 358 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Traf3Q60803 567 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Pde1aQ61481 565 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Panx2Q6IMP4 677 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Clec4gQ8BNX1 294 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Nlrp4aQ8BU40 982 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Sik2Q8CFH6 931 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Btbd6Q8K2J9 488 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ccdc80Q8R2G6 949 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 SncaipQ99ME3 962 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mageb16Q9CWV4 363 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Cuedc2Q9CXX9 284 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Get4Q9D1H7 327 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Rabgef1Q9JM13 491 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 LctF8VPT3 1931 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Zscan4dA7KBS4 506 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 LdhcP00342 332 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Cyp21P03940 487 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 AgtP11859 477 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 HalP35492 657 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Anks1aP59672 1150 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Wbp2P97765 261 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Adamts1P97857 968 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Smyd5Q3TYX3 416 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ccdc110Q3V125 848 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Sh3gl1Q62419 368 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Adcy2Q80TL1 1090 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 NrcamQ810U4 1256 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Susd6Q8BGE4 302 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Frmd4aQ8BIE6 1020 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Tmem132cQ8CEF9 1099 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Hmgcll1Q8JZS7 343 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Pnpt1Q8K1R3 783 aaKnown RBP7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gle1Q8R322 699 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Bzw2Q91VK1 419 aaKnown RBP7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Sfxn1Q99JR1 322 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 NonoQ99K48 473 aaKnown RBP7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ddx56Q9D0R4 546 aaKnown RBP7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 4930578G10RikQ9D4Q4 153 aa7.14□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Cdk14O35495 469 aa7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Hnrnph1O35737 449 aaKnown RBP7.13□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Art2bO35975 289 aa7.13□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms